HHsearch alignment for GI: 254780829 and conserved domain: cd03231
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=96.17 E-value=0.0036 Score=39.94 Aligned_cols=23 Identities=43% Similarity=0.697 Sum_probs=21.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 69967988868999999999707
Q gi|254780829|r 56 ILLVGPTGVGKTAISRRLARLAG 78 (437)
Q Consensus 56 iLLiGPtGtGKTlLAktLA~~l~ 78 (437)
T Consensus 29 ~~l~G~NGsGKSTLlk~i~Gl~~ 51 (201)
T cd03231 29 LQVTGPNGSGKTTLLRILAGLSP 51 (201)
T ss_pred EEEECCCCCCHHHHHHHHHCCCC
T ss_conf 99999999999999999966778