>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.

Probab=96.07  E-value=0.0041  Score=39.57  Aligned_cols=45  Identities=27%  Similarity=0.375  Sum_probs=29.1

Q ss_pred             CCCCC-CEEEECCCCCCHHHHHHHHHHHHCCCEEEEECCCEEECCCCCCCH
Q ss_conf             65668-669967988868999999999707877971434101212234310
Q gi|254780829|r   50 ELMPK-NILLVGPTGVGKTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNV   99 (437)
Q Consensus        50 e~~ps-NiLLiGPtGtGKTlLAktLA~~l~VPF~~~daT~ftE~gyvG~DV   99 (437)
T Consensus        29 ~i~~Gei~~llG~nGsGKSTLl~~l~G~~~-~~~~~~G~----i~~~g~~~   74 (202)
T cd03233          29 VVKPGEMVLVLGRPGSGCSTLLKALANRTE-GNVSVEGD----IHYNGIPY   74 (202)
T ss_pred             EECCCEEEEEECCCCCCHHHHHHHHHCCCC-CCCCEEEE----EEECCEEC
T ss_conf             980984999998999988999999837878-98751379----99999994