HHsearch alignment for GI: 254780829 and conserved domain: cd03235
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=95.45 E-value=0.011 Score=36.89 Aligned_cols=24 Identities=29% Similarity=0.599 Sum_probs=21.8
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 669967988868999999999707
Q gi|254780829|r 55 NILLVGPTGVGKTAISRRLARLAG 78 (437)
Q Consensus 55 NiLLiGPtGtGKTlLAktLA~~l~ 78 (437)
T Consensus 27 ~~~liGpNGaGKSTllk~i~Gl~~ 50 (213)
T cd03235 27 FLAIVGPNGAGKSTLLKAILGLLK 50 (213)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCC
T ss_conf 999999999869999999976878