HHsearch alignment for GI: 254780829 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.48 E-value=0.014 Score=36.05 Aligned_cols=41 Identities=29% Similarity=0.530 Sum_probs=29.5
Q ss_pred CCCC-CEEEECCCCCCHHHHHHHHHHHHCCC--EEEEECCCEEE
Q ss_conf 5668-66996798886899999999970787--79714341012
Q gi|254780829|r 51 LMPK-NILLVGPTGVGKTAISRRLARLAGAP--FIKVEVTKFTE 91 (437)
Q Consensus 51 ~~ps-NiLLiGPtGtGKTlLAktLA~~l~VP--F~~~daT~ftE 91 (437)
T Consensus 26 i~~Ge~vaivG~sGsGKSTLl~ll~gl~~p~~G~I~idg~~i~~ 69 (229)
T cd03254 26 IKPGETVAIVGPTGAGKTTLINLLMRFYDPQKGQILIDGIDIRD 69 (229)
T ss_pred ECCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCEEEECCEECCC
T ss_conf 87999999999999809999999966866787389999999541