HHsearch alignment for GI: 254780829 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.07 E-value=0.0042 Score=39.55 Aligned_cols=23 Identities=30% Similarity=0.690 Sum_probs=21.0
Q ss_pred EEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 69967988868999999999707
Q gi|254780829|r 56 ILLVGPTGVGKTAISRRLARLAG 78 (437)
Q Consensus 56 iLLiGPtGtGKTlLAktLA~~l~ 78 (437)
T Consensus 29 ~~iiG~SGsGKSTll~~i~gL~~ 51 (235)
T cd03261 29 LAIIGPSGSGKSTLLRLIVGLLR 51 (235)
T ss_pred EEEECCCCCHHHHHHHHHHCCCC
T ss_conf 99999999729999999975999