HHsearch alignment for GI: 254780829 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=95.53 E-value=0.011 Score=36.74 Aligned_cols=34 Identities=24% Similarity=0.365 Sum_probs=25.7
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHCC--CEEEEECCC
Q ss_conf 6699679888689999999997078--779714341
Q gi|254780829|r 55 NILLVGPTGVGKTAISRRLARLAGA--PFIKVEVTK 88 (437)
Q Consensus 55 NiLLiGPtGtGKTlLAktLA~~l~V--PF~~~daT~ 88 (437)
T Consensus 49 ~vaIvG~sGsGKSTL~~ll~gl~~p~~G~I~idg~d 84 (257)
T cd03288 49 KVGICGRTGSGKSSLSLAFFRMVDIFDGKIVIDGID 84 (257)
T ss_pred EEEEECCCCCCHHHHHHHHHHCCCCCCCEEEECCEE
T ss_conf 999999999819999999960566788889999899