HHsearch alignment for GI: 254780829 and conserved domain: cd03290
>cd03290 ABCC_SUR1_N The SUR domain 1. The sulfonylurea receptor SUR is an ATP transporter of the ABCC/MRP family with tandem ATPase binding domains. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=95.69 E-value=0.008 Score=37.70 Aligned_cols=25 Identities=20% Similarity=0.340 Sum_probs=22.2
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 6699679888689999999997078
Q gi|254780829|r 55 NILLVGPTGVGKTAISRRLARLAGA 79 (437)
Q Consensus 55 NiLLiGPtGtGKTlLAktLA~~l~V 79 (437)
T Consensus 29 ~~~IvG~sGsGKSTLl~~l~g~~~~ 53 (218)
T cd03290 29 LTMIVGQVGCGKSSLLLAILGEMQT 53 (218)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCC
T ss_conf 9999999998099999998555656