HHsearch alignment for GI: 254780829 and conserved domain: cd03369
>cd03369 ABCC_NFT1 Domain 2 of NFT1 (New full-length MRP-type transporter 1). NFT1 belongs to the MRP (mulrtidrug resisitance-associated protein) family of ABC transporters. Some of the MRP members have five additional transmembrane segments in their N-terminas, but the function of these additional membrane-spanning domains is not clear. The MRP was found in the multidrug-resisting lung cancer cell in which p-glycoprotein was not overexpressed. MRP exports glutathione by drug stimulation, as well as, certain substrates in conjugated forms with anions such as glutathione, glucuronate, and sulfate.
Probab=95.74 E-value=0.01 Score=36.97 Aligned_cols=29 Identities=34% Similarity=0.461 Sum_probs=24.0
Q ss_pred CCCC-CEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 5668-6699679888689999999997078
Q gi|254780829|r 51 LMPK-NILLVGPTGVGKTAISRRLARLAGA 79 (437)
Q Consensus 51 ~~ps-NiLLiGPtGtGKTlLAktLA~~l~V 79 (437)
T Consensus 31 i~~Ge~v~ivG~sGsGKSTLl~ll~g~~~p 60 (207)
T cd03369 31 VKAGEKIGIVGRTGAGKSTLILALFRFLEA 60 (207)
T ss_pred ECCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 869999999999998799999999987288