HHsearch alignment for GI: 254780829 and conserved domain: pfam00308

Probab=98.33  E-value=2.7e-05  Score=53.69  Aligned_cols=66  Identities=17%  Similarity=0.302  Sum_probs=46.1

Q ss_pred             CCCCCCCCC--EEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             255433451--268861554246788876434688999999998751968998424999999999984040012372467
Q gi|254780829|r  312 LLPEIQGRF--PVRVHLKSLNKSDFRLILTDTESNLILQYKELMKTEGIILDFTEDSIDALADVAVNLNSTVGDIGARRL  389 (437)
Q Consensus       312 lipE~~GR~--p~~v~l~~L~~~~l~~IL~epk~~l~~q~~~lf~~~~v~L~ft~~Al~~IA~~A~~~~t~~~~~GAR~L  389 (437)
T Consensus       147 ~~~dL~SRL~~g~~~~i~~pdd~~~~~iL~~-----------~a~~r~l~--l~~~v~~yl~~r~~R--------~~r~L  205 (219)
T pfam00308       147 FEDRLRSRFEWGLIIAIEPPDLETRLAILRK-----------KAEEENIN--IPNEVLNFIAQRITD--------NVREL  205 (219)
T ss_pred             CCHHHHHHHHCCEEEECCCCCHHHHHHHHHH-----------HHHHCCCC--CCHHHHHHHHHHCCC--------CHHHH
T ss_conf             3277999986875661169999999999999-----------99984999--999999999984279--------89999


Q ss_pred             HHHHHHHHH
Q ss_conf             999999867
Q gi|254780829|r  390 QTVMERVLE  398 (437)
Q Consensus       390 rtI~E~~l~  398 (437)
T Consensus       206 ~~~L~~L~~  214 (219)
T pfam00308       206 EGALNRLLA  214 (219)
T ss_pred             HHHHHHHHH
T ss_conf             999999998