HHsearch alignment for GI: 254780829 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=97.12 E-value=0.0005 Score=45.52 Aligned_cols=28 Identities=36% Similarity=0.414 Sum_probs=23.6
Q ss_pred CCCCEEEECCCCCCHHHHHHHHHHHHCC
Q ss_conf 6686699679888689999999997078
Q gi|254780829|r 52 MPKNILLVGPTGVGKTAISRRLARLAGA 79 (437)
Q Consensus 52 ~psNiLLiGPtGtGKTlLAktLA~~l~V 79 (437)
T Consensus 138 ~~~~ilIsG~TGSGKTT~l~all~~i~~ 165 (283)
T pfam00437 138 ARGNILVSGGTGSGKTTLLYALLNEINT 165 (283)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf 1975999889999889999999984087