HHsearch alignment for GI: 254780829 and conserved domain: pfam03969

>pfam03969 AFG1_ATPase AFG1-like ATPase. This family of proteins contains a P-loop motif and are predicted to be ATPases.
Probab=96.33  E-value=0.03  Score=33.98  Aligned_cols=71  Identities=23%  Similarity=0.199  Sum_probs=41.3

Q ss_pred             CHHHHHHH-HHHCEECHHHHHHHHHHHHHHHHHHHCCCCC-------------CCCCCCCCCEEEECCCCCCHHHHHHHH
Q ss_conf             88999998-6203048689999999999877886408644-------------446656686699679888689999999
Q gi|254780829|r    8 SPREIVSE-LDRYIIGQQDAKRAVAIALRNRWRRQQLPAD-------------LRDELMPKNILLVGPTGVGKTAISRRL   73 (437)
Q Consensus         8 tP~~i~~~-Ld~~VvGQ~~AKk~lavav~nhy~R~~~~~~-------------~~~e~~psNiLLiGPtGtGKTlLAktL   73 (437)
T Consensus         2 tP~~~Y~~~v~~g~l~~D~~Q~~a~~~L~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~kGlYl~G~VGrGKTmLMDlF   81 (361)
T pfam03969         2 TPPQRYTAQLQRGAIFPDVAQANAVPALDRLYQRLQAADFVRQSGAGGKLWGRKRSHQPVRGLYLWGGVGRGKTHLMDSF   81 (361)
T ss_pred             CHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHH
T ss_conf             87999999986799999989999999999999999715565555234443157887999986898899888699999999


Q ss_pred             HHHHC
Q ss_conf             99707
Q gi|254780829|r   74 ARLAG   78 (437)
Q Consensus        74 A~~l~   78 (437)
T Consensus        82 y~~lp   86 (361)
T pfam03969        82 FESLP   86 (361)
T ss_pred             HHHCC
T ss_conf             98677