RPSBLAST alignment for GI: 254780829 and conserved domain: COG1220
>gnl|CDD|31413 COG1220, HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones]. Length = 444
Score = 589 bits (1521), Expect = e-169
Identities = 255/445 (57%), Positives = 329/445 (73%), Gaps = 16/445 (3%)
Query: 6 NFSPREIVSELDRYIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVG 65
+PREIVSELDRYIIGQ +AK+AVAIALRNRWRR QL +LRDE+ PKNIL++GPTGVG
Sbjct: 3 EMTPREIVSELDRYIIGQDEAKKAVAIALRNRWRRMQLEEELRDEVTPKNILMIGPTGVG 62
Query: 66 KTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQ 125
KT I+RRLA+LAGAPFIKVE TKFTE+GYVGR+VE IIRDLV++A+ +VRE + ++V+++
Sbjct: 63 KTEIARRLAKLAGAPFIKVEATKFTEVGYVGRDVESIIRDLVEIAVKLVREEKIEKVKDK 122
Query: 126 ASINAEERILDALVGKT-----------ATSNTREVFRKKLRDGEISDKEIDIEVADTSS 174
A AEERILDALV +S TRE FRKKLR+GE+ DKEI+IEVAD
Sbjct: 123 AEELAEERILDALVPPAKNFWGQSENKQESSATREKFRKKLREGELDDKEIEIEVADKGP 182
Query: 175 DISNFDIPG--GASVGILNLSELFSKVMGSGRKKKIRMSVQKCYPELMRDESDRLIDMDT 232
F+I G G NL ++F + G +KKK ++ V++ L+ +E+D+LID +
Sbjct: 183 --PGFEIMGPPGMEEMTNNLQDMFGNLGG-KKKKKRKLKVKEAKKLLIEEEADKLIDQEE 239
Query: 233 VHRDSIQMVENYGIVFLDEFDKIVARDSGNGIGVSREGVQRDLLPLVEGSSVSTKYGSIN 292
+ +++I E GIVF+DE DKI R G VSREGVQRDLLPLVEGS+VSTKYG +
Sbjct: 240 IKQEAIDAAEQNGIVFIDEIDKIAKRGGSGGPDVSREGVQRDLLPLVEGSTVSTKYGPVK 299
Query: 293 TDHILFIASGAFHVSRPADLLPEIQGRFPVRVHLKSLNKSDFRLILTDTESNLILQYKEL 352
TDHILFIASGAFHV++P+DL+PE+QGRFP+RV L +L K DF ILT+ +++LI QYK L
Sbjct: 300 TDHILFIASGAFHVAKPSDLIPELQGRFPIRVELDALTKEDFERILTEPKASLIKQYKAL 359
Query: 353 MKTEGIILDFTEDSIDALADVAVNLNSTVGDIGARRLQTVMERVLEDISFSASDLQEKTV 412
+KTEG+ L+FT+D+I +A++A +N +IGARRL TV+ER+LEDISF A D+ + V
Sbjct: 360 LKTEGVELEFTDDAIKRIAEIAYQVNEKTENIGARRLHTVLERLLEDISFEAPDMSGQKV 419
Query: 413 VIDAEYVRLHIGDFPSETDMYHFIL 437
IDAEYV +GD + D+ FIL
Sbjct: 420 TIDAEYVEEKLGDLVANEDLSRFIL 444