RPSBLAST alignment for GI: 254780829 and conserved domain: COG1220

>gnl|CDD|31413 COG1220, HslU, ATP-dependent protease HslVU (ClpYQ), ATPase subunit [Posttranslational modification, protein turnover, chaperones]. Length = 444
 Score =  589 bits (1521), Expect = e-169
 Identities = 255/445 (57%), Positives = 329/445 (73%), Gaps = 16/445 (3%)

Query: 6   NFSPREIVSELDRYIIGQQDAKRAVAIALRNRWRRQQLPADLRDELMPKNILLVGPTGVG 65
             +PREIVSELDRYIIGQ +AK+AVAIALRNRWRR QL  +LRDE+ PKNIL++GPTGVG
Sbjct: 3   EMTPREIVSELDRYIIGQDEAKKAVAIALRNRWRRMQLEEELRDEVTPKNILMIGPTGVG 62

Query: 66  KTAISRRLARLAGAPFIKVEVTKFTEIGYVGRNVEQIIRDLVDVAINIVRESRRDEVREQ 125
           KT I+RRLA+LAGAPFIKVE TKFTE+GYVGR+VE IIRDLV++A+ +VRE + ++V+++
Sbjct: 63  KTEIARRLAKLAGAPFIKVEATKFTEVGYVGRDVESIIRDLVEIAVKLVREEKIEKVKDK 122

Query: 126 ASINAEERILDALVGKT-----------ATSNTREVFRKKLRDGEISDKEIDIEVADTSS 174
           A   AEERILDALV               +S TRE FRKKLR+GE+ DKEI+IEVAD   
Sbjct: 123 AEELAEERILDALVPPAKNFWGQSENKQESSATREKFRKKLREGELDDKEIEIEVADKGP 182

Query: 175 DISNFDIPG--GASVGILNLSELFSKVMGSGRKKKIRMSVQKCYPELMRDESDRLIDMDT 232
               F+I G  G      NL ++F  + G  +KKK ++ V++    L+ +E+D+LID + 
Sbjct: 183 --PGFEIMGPPGMEEMTNNLQDMFGNLGG-KKKKKRKLKVKEAKKLLIEEEADKLIDQEE 239

Query: 233 VHRDSIQMVENYGIVFLDEFDKIVARDSGNGIGVSREGVQRDLLPLVEGSSVSTKYGSIN 292
           + +++I   E  GIVF+DE DKI  R    G  VSREGVQRDLLPLVEGS+VSTKYG + 
Sbjct: 240 IKQEAIDAAEQNGIVFIDEIDKIAKRGGSGGPDVSREGVQRDLLPLVEGSTVSTKYGPVK 299

Query: 293 TDHILFIASGAFHVSRPADLLPEIQGRFPVRVHLKSLNKSDFRLILTDTESNLILQYKEL 352
           TDHILFIASGAFHV++P+DL+PE+QGRFP+RV L +L K DF  ILT+ +++LI QYK L
Sbjct: 300 TDHILFIASGAFHVAKPSDLIPELQGRFPIRVELDALTKEDFERILTEPKASLIKQYKAL 359

Query: 353 MKTEGIILDFTEDSIDALADVAVNLNSTVGDIGARRLQTVMERVLEDISFSASDLQEKTV 412
           +KTEG+ L+FT+D+I  +A++A  +N    +IGARRL TV+ER+LEDISF A D+  + V
Sbjct: 360 LKTEGVELEFTDDAIKRIAEIAYQVNEKTENIGARRLHTVLERLLEDISFEAPDMSGQKV 419

Query: 413 VIDAEYVRLHIGDFPSETDMYHFIL 437
            IDAEYV   +GD  +  D+  FIL
Sbjct: 420 TIDAEYVEEKLGDLVANEDLSRFIL 444