HHsearch alignment for GI: 254780831 and conserved domain: COG0857
>COG0857 Pta BioD-like N-terminal domain of phosphotransacetylase [General function prediction only].
Probab=96.87 E-value=0.0038 Score=40.95 Aligned_cols=190 Identities=16% Similarity=0.212 Sum_probs=90.7
Q ss_pred CCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEE-----ECC
Q ss_conf 420102446665425789999898723577506988224678765310002456311233445766322303-----223
Q gi|254780831|r 95 KKFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYGIK-----IMS 169 (341)
Q Consensus 95 ~~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~-----~~s 169 (341)
T Consensus 2 ~~~l~l~p~~~~~G~tsi~lgLl~~l~~k~~kva~~kPI~--~~----~~~~~~~~~e~---~~~~~~~~l~~~~~~~~~ 72 (354)
T COG0857 2 SRTLLLIPTETGVGKTSISLGLLRALEQKGLKVAYFKPIG--TR----TGKDADDLTEE---DIRATSSSLTYAEPLVLS 72 (354)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC--CC----CCCCCCHHHHH---HHHHHHHHCCCCCCCCHH
T ss_conf 6149984268886288999999999997073269984045--55----67765206899---998765205667530000
Q ss_pred CC-CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEE------CCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHH
Q ss_conf 33-43552210001342024789998675213777589974------556444210000000223402674214431134
Q gi|254780831|r 170 MA-SLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLID------MPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALI 242 (341)
Q Consensus 170 ~g-~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD------~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~ 242 (341)
T Consensus 73 ~ae~L~~~~~~d~l~e-----~i~~~y~e~~-~~~~~vv~~g~~~~~~~~~~~~ln~~iA~~Ln-a~~vlva~~~~~~~~ 145 (354)
T COG0857 73 FAEVLLSTGQDDVLLE-----EILANYAELA-KDADVVVVEGDVPTREGPYALDLNYEIAKNLN-AAAVLVARALLVTPY 145 (354)
T ss_pred HHHHHHCCCCCHHHHH-----HHHHHHHHHH-CCCCEEEECCCEECCCCCCCCCCCHHHHHHCC-CCHHHCCCCCCCCHH
T ss_conf 6888741564167999-----9999999872-36766884253001335764101479885068-115431141337766
Q ss_pred H----HHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHH
Q ss_conf 5----6667776400122114455442024587788665124776589999984797898827998999
Q gi|254780831|r 243 D----VKRAISMYQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVR 307 (341)
Q Consensus 243 d----a~r~~~~~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~ 307 (341)
T Consensus 146 ~~~~~i~~~~~~~~~~~~~l~gVv~N~~--~~~~~~~-----~~~~l~~~~~~~~~~~~~~l~~~~ll~ 207 (354)
T COG0857 146 ELKSRVELALAAFGAAGNNLAGVVINNA--PVDEAGR-----TEDLLAEFLESSGIAVVGVLPPNRLLR 207 (354)
T ss_pred HHHHHHHHHHHHHCCCCCCEEEEEECCC--CHHHHHH-----HHHHHHHHHHHCCCCCCCCCCHHHHHC
T ss_conf 6566999999886056883589996578--7555232-----446899876302543224478778753