HHsearch alignment for GI: 254780831 and conserved domain: COG1797
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism].
Probab=98.24 E-value=1.3e-05 Score=57.34 Aligned_cols=198 Identities=19% Similarity=0.266 Sum_probs=99.4
Q ss_pred EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECC--CCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf 102446665425789999898723577506988224--678765310002456311233445766322303223334355
Q gi|254780831|r 98 VAVASGKGGVGKSTTVVNIACALKNKGKNVAILDAD--VYGPSIPKLLKISGKVEISDKKFLKPKENYGIKIMSMASLVD 175 (341)
Q Consensus 98 iav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaD--i~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s~g~l~~ 175 (341)
T Consensus 3 vvIAg~~SG~GKTTvT~glm~aL~~rg~~VqpfKvGPDYIDP~~H~~a--tG~~------------srNLD~----~mm~ 64 (451)
T COG1797 3 VVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPFKVGPDYIDPGYHTAA--TGRP------------SRNLDS----WMMG 64 (451)
T ss_pred EEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHH--HCCC------------CCCCCH----HHCC
T ss_conf 599548888858999999999998668721665568786381356676--3885------------677765----4469
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC------CCHHHHCCCC--CCEEEEECCCCCHHHHH--H
Q ss_conf 221000134202478999867521377758997455644421------0000000223--40267421443113456--6
Q gi|254780831|r 176 ENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDA------HLTIAQKIPL--SGVVIVSTPQDLALIDV--K 245 (341)
Q Consensus 176 ~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~------~lsl~~~~~~--~~~iiVttP~~~s~~da--~ 245 (341)
T Consensus 65 ~------------~~v~~~f~~~~-~~adi~vIEGVMGLfDG~~~~~~~gSTA~lAk~l~~PVvLVid~~~~s~S~AAiv 131 (451)
T COG1797 65 E------------EGVRALFARAA-ADADIAVIEGVMGLFDGRGSATDTGSTADLAKLLGAPVVLVVDASGLSRSVAAIV 131 (451)
T ss_pred H------------HHHHHHHHHHC-CCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHH
T ss_conf 9------------89999999862-7898799961230236887776777799999985999899995752257899999
Q ss_pred HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHH-HCCCEEEECCCCHHHHHHHCCCCCEEEECCCCH
Q ss_conf 6777640012211445544202458778866512477658999998-479789882799899975028821799779998
Q gi|254780831|r 246 RAISMYQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEK-IGIPFLESVPFDMDVRVLSDLGIPIVVHNMNSA 324 (341)
Q Consensus 246 r~~~~~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~-~~i~~lg~IP~d~~i~~a~~~g~P~v~~~p~s~ 324 (341)
T Consensus 132 ~G~~~fd-p~v~iaGVIlNrV------gserH~----~llr~Ale~~~gv~vlG~lpr~~~l~lp~RH-LGLV~a~E~~~ 199 (451)
T COG1797 132 KGFKHFD-PDVNIAGVILNRV------GSERHY----ELLRDALEEYTGVPVLGYLPRDDDLELPSRH-LGLVPASERLE 199 (451)
T ss_pred HHHHHCC-CCCCEEEEEEECC------CCHHHH----HHHHHHHHHCCCCCEEEEECCCCCCCCCCCC-CCCCCCHHHHH
T ss_conf 8898619-9882578997247------778899----9999875532798579874278556785413-26534303444
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999999999
Q gi|254780831|r 325 TSEIYQEISDRIQQ 338 (341)
Q Consensus 325 ~a~~~~~iA~~i~~ 338 (341)
T Consensus 200 ~~~~~~~~a~~v~~ 213 (451)
T COG1797 200 LEAKLEALAEVVEK 213 (451)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 89999999999986