HHsearch alignment for GI: 254780831 and conserved domain: COG3640
>COG3640 CooC CO dehydrogenase maturation factor [Cell division and chromosome partitioning].
Probab=99.90 E-value=4.3e-23 Score=173.90 Aligned_cols=220 Identities=23% Similarity=0.357 Sum_probs=159.1
Q ss_pred CEECCCCCCCCCHHHHHHHHHHHHCCC-CCEEEEEECCCCCCCCCCEECCCCCCCCCCCC------CC------C-----
Q ss_conf 010244666542578999989872357-75069882246787653100024563112334------45------7-----
Q gi|254780831|r 97 FVAVASGKGGVGKSTTVVNIACALKNK-GKNVAILDADVYGPSIPKLLKISGKVEISDKK------FL------K----- 158 (341)
Q Consensus 97 iiav~SgKGGVGKSt~s~nLa~ala~~-G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~------~i------~----- 158 (341)
T Consensus 2 kIaI~-GKGG~GKTtiaalll~~l~~~~~~~VLvVDaDp-d~nL~~~LGve~~~~~lg~~~e~~~k~~~a~~~~~~~~~f 79 (255)
T COG3640 2 KIAIT-GKGGVGKTTIAALLLKRLLSKGGYNVLVVDADP-DSNLPEALGVEEPMKYLGGKRELLKKRTGAEPGGPPGEMF 79 (255)
T ss_pred EEEEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC-CCCHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 69996-599765899999999999864895499994899-9990776299998755300899999986147899955300
Q ss_pred ---------C----CCCCCEEECCCCCCCCCCCCCCCCCCC--HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHH
Q ss_conf ---------6----632230322333435522100013420--2478999867521377758997455644421000000
Q gi|254780831|r 159 ---------P----KENYGIKIMSMASLVDENVAMIWRGPM--VQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQ 223 (341)
Q Consensus 159 ---------p----~~~~gi~~~s~g~l~~~~~~~~~rg~~--~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~ 223 (341)
T Consensus 80 k~~~~~~di~~e~~~e~~~~~LLvmGkie~~G-----eGC~Cp~~allR~~l~~l~~~~~e~VivDtEAGi--EHfgRg~ 152 (255)
T COG3640 80 KENPLVSDLPDEYLVENGDIDLLVMGKIEEGG-----EGCACPMNALLRRLLRHLILNRYEVVIVDTEAGI--EHFGRGT 152 (255)
T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEECCCCCCC-----CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCH--HHHCCCC
T ss_conf 13754335169885006880079952556799-----7431627899999999975166748999633456--6656563
Q ss_pred CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCC
Q ss_conf 02234026742144311345666777640012211445544202458778866512477658999998479789882799
Q gi|254780831|r 224 KIPLSGVVIVSTPQDLALIDVKRAISMYQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFD 303 (341)
Q Consensus 224 ~~~~~~~iiVttP~~~s~~da~r~~~~~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d 303 (341)
T Consensus 153 ~~~vD~vivVvDpS~~sl~taeri~~L~~elg~k~i~~V~NKv----~---e~e-----~~~~~~~~~~~~~vlg~iP~d 220 (255)
T COG3640 153 IEGVDLVIVVVDPSYKSLRTAERIKELAEELGIKRIFVVLNKV----D---EEE-----ELLRELAEELGLEVLGVIPYD 220 (255)
T ss_pred CCCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEC----C---CHH-----HHHHHHHHCCCCEEEEECCCC
T ss_conf 2578779999578778888899999999871875499999503----4---115-----777765322797489971698
Q ss_pred HHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8999750288217997799989999999999999983
Q gi|254780831|r 304 MDVRVLSDLGIPIVVHNMNSATSEIYQEISDRIQQFF 340 (341)
Q Consensus 304 ~~i~~a~~~g~P~v~~~p~s~~a~~~~~iA~~i~~~l 340 (341)
T Consensus 221 ~~v~~~dl~G~pl~~~-~--~v~~~i~~I~~~l~~~~ 254 (255)
T COG3640 221 PEVVEADLKGEPLNEE-P--EVLKEIEEIAERLIKLV 254 (255)
T ss_pred HHHHHCCCCCCCCCCC-H--HHHHHHHHHHHHHHHCC
T ss_conf 7887422568842123-5--55789999999998504