HHsearch alignment for GI: 254780831 and conserved domain: PRK00771
>PRK00771 signal recognition particle protein Srp54; Provisional.
Probab=98.11 E-value=7.5e-05 Score=52.31 Aligned_cols=43 Identities=30% Similarity=0.521 Sum_probs=38.2
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC
Q ss_conf 20102446665425789999898723577506988224678765
Q gi|254780831|r 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSI 139 (341)
Q Consensus 96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~ 139 (341)
T Consensus 98 ~Vim~v-GlqGsGKTTT~aKLA~~~kk~g~kv~lvaaDt~RpaA 140 (433)
T PRK00771 98 QTILLV-GLQGSGKTTTAAKLARYFQKKGLKVGVICADTWRPGA 140 (433)
T ss_pred EEEEEE-CCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCHHH
T ss_conf 589997-3788978999999999999779946785067883689