HHsearch alignment for GI: 254780831 and conserved domain: PRK04690

>PRK04690 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional.
Probab=94.01  E-value=0.036  Score=34.44  Aligned_cols=86  Identities=23%  Similarity=0.268  Sum_probs=52.6

Q ss_pred             EEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHC
Q ss_conf             99999668784789999999999986067634235503222343332223465420102446665425789999898723
Q gi|254780831|r   42 YLSITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTENKNPPQQRNNLNVKKFVAVASGKGGVGKSTTVVNIACALK  121 (341)
Q Consensus        42 ~i~l~lt~~~cp~~~~l~~~i~~~l~~i~gv~~v~V~lt~~~~~~~~~~~~~~~~iiav~SgKGGVGKSt~s~nLa~ala  121 (341)
T Consensus        69 ~~d~vv~SPGi~~~~p~~~~a~~--~~i~i~~eiel~~~~~~~~~-----~~~~k~IaVT---GTNGKTTTt~ll~~iL~  138 (468)
T PRK04690         69 AFEVVVKSPGISPYRPEALAAAA--QGTPFIGGTALWFAEHAQPD-----GSVPGAVCVT---GTKGKSTTTALLAHLLR  138 (468)
T ss_pred             CCCEEEECCCCCCCCHHHHHHHH--CCCCEEEHHHHHHHHHHCCC-----CCCCCEEEEE---CCCCHHHHHHHHHHHHH
T ss_conf             48899989957986899999998--79948868999998753112-----5678789996---99858999999999998


Q ss_pred             CCCCEEEEEECCCCCCC
Q ss_conf             57750698822467876
Q gi|254780831|r  122 NKGKNVAILDADVYGPS  138 (341)
Q Consensus       122 ~~G~~V~liDaDi~~ps  138 (341)
T Consensus       139 ~~g~~~~~-~GNIG~P~  154 (468)
T PRK04690        139 AAGHRTAL-VGNIGQPL  154 (468)
T ss_pred             HCCCCEEE-ECCCCHHH
T ss_conf             57998289-86776446