HHsearch alignment for GI: 254780831 and conserved domain: PRK13233

Probab=99.98  E-value=1e-31  Score=231.34  Aligned_cols=227  Identities=21%  Similarity=0.223  Sum_probs=158.6

Q ss_pred             CCCCEECCCCCCCCCHHHHHHHHHHHHCC-CCCEEEEEECCCCCCCCCCEECCCCCCCCCCC------CC-----CCCCC
Q ss_conf             54201024466654257899998987235-77506988224678765310002456311233------44-----57663
Q gi|254780831|r   94 VKKFVAVASGKGGVGKSTTVVNIACALKN-KGKNVAILDADVYGPSIPKLLKISGKVEISDK------KF-----LKPKE  161 (341)
Q Consensus        94 ~~~iiav~SgKGGVGKSt~s~nLa~ala~-~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~------~~-----i~p~~  161 (341)
T Consensus         1 m~~~iaiy-GKGGIGKSTTt~NLaaALA~l~GkrVl~IgcDPk~dST~~l~g~~~~~tv~d~l~~~~~~~~~~e~ii~~g   79 (275)
T PRK13233          1 MTRKIAIY-GKGGIGKSTTTQNTAAAMAHFHDKKVFIHGCDPKADSTRLILGGKPQTTMMDTLRELGEEKVTPDKVIKTG   79 (275)
T ss_pred             CCCEEEEE-CCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHCCCCCCCCHHHHHHHCCCCCCCHHHHHHCC
T ss_conf             97389998-99854465459999999996479889997978876136776089878839999986288755388887537


Q ss_pred             CCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH--CCCCCCEEEEECCCCCCCCCCH-HHH---CCCCCCEEEEEC
Q ss_conf             2230322333435522100013420247899986752--1377758997455644421000-000---022340267421
Q gi|254780831|r  162 NYGIKIMSMASLVDENVAMIWRGPMVQSAIMHMLHNV--VWGQLDFLLIDMPPGTGDAHLT-IAQ---KIPLSGVVIVST  235 (341)
Q Consensus       162 ~~gi~~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~--~w~~~D~liiD~ppG~gd~~ls-l~~---~~~~~~~iiVtt  235 (341)
T Consensus        80 ~~gv~cVEaGg-p~pG~gcagrgii~~---~~lle~~~~~~~~~D~Vl~DvLGd---VvcGgFa~Pir~~~AdeV~IVts  152 (275)
T PRK13233         80 FKGIRCVESGG-PEPGVGCAGRGVITA---ITLMEEHGAYEDDLDFVFFDVLGD---VVCGGFAMPIRDGKAQEVYIVAS  152 (275)
T ss_pred             CCCCEEEECCC-CCCCCCCCCCCHHHH---HHHHHHHCCCCCCCCEEEEECCCC---CCCCCCCCCCCCCCCCEEEEEEC
T ss_conf             89857986899-986665576312358---888998097434688899841561---10555103431366888999946


Q ss_pred             CCCCHHHHHHHHH---HH-HHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHC
Q ss_conf             4431134566677---76-4001221144554420245877886651247765899999847978988279989997502
Q gi|254780831|r  236 PQDLALIDVKRAI---SM-YQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVRVLSD  311 (341)
Q Consensus       236 P~~~s~~da~r~~---~~-~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~~a~~  311 (341)
T Consensus       153 ~E~msL~aannI~~~l~~~~~~~~~~l~Gii~N~r----~~-~-----~e~~~v~~fa~~ig~~vi~~IPr~~~V~~Ae~  222 (275)
T PRK13233        153 GEMMALYAANNICKGLVKYAEQSGVRLGGIICNSR----NV-D-----GELELLEEFTDAIGTQLIHFVPRDNIVQKAEF  222 (275)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC----CC-C-----CHHHHHHHHHHHHCCCEEEECCCCHHHHHHHH
T ss_conf             83799999999999999985058963899997178----88-6-----07999999999859957997789778887787


Q ss_pred             CCCCEEEECCCCHHHHHHHHHHHHHHH
Q ss_conf             882179977999899999999999999
Q gi|254780831|r  312 LGIPIVVHNMNSATSEIYQEISDRIQQ  338 (341)
Q Consensus       312 ~g~P~v~~~p~s~~a~~~~~iA~~i~~  338 (341)
T Consensus       223 ~~~tVie~~P~S~~A~~Y~~LAk~I~~  249 (275)
T PRK13233        223 NKKTVVEFDPTCNQAHEYKELARKIIE  249 (275)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf             397679989999799999999999985