HHsearch alignment for GI: 254780831 and conserved domain: PRK13849

>PRK13849 putative crown gall tumor protein VirC1; Provisional.
Probab=99.64  E-value=6.1e-16  Score=126.23  Aligned_cols=131  Identities=21%  Similarity=0.297  Sum_probs=80.0

Q ss_pred             CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCC
Q ss_conf             20102446665425789999898723577506988224678765310002456311233445766322303223334355
Q gi|254780831|r   96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYGIKIMSMASLVD  175 (341)
Q Consensus        96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s~g~l~~  175 (341)
T Consensus         2 ~vi~~~~~KGG~GKtT~a~~la~~~~~~g~~v~~iD~Dpq~s~~~W-~e~---a--~~~~~~~~~----~~v----~~~~   67 (231)
T PRK13849          2 KLLTFCSFKGGAGKTTALMGLCAALASDGKRVALFEADENRPLTRW-KEN---A--LRSNTWDPA----CEV----YAAD   67 (231)
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHH-HHH---H--HHCCCCCCC----CCE----EECC
T ss_conf             3799961899876999999999999978995999968998688999-987---6--525898877----523----4056


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHC
Q ss_conf             221000134202478999867521377758997455644421000000022340267421443113456667776400
Q gi|254780831|r  176 ENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALIDVKRAISMYQK  253 (341)
Q Consensus       176 ~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~da~r~~~~~~~  253 (341)
T Consensus        68 -~~~------~l~~~~e~----~~~~~~D~VIIDtpg~~s~~~~~Ai--~~ADLVLIP~qPSp~D~~~a~~tv~~i~~  132 (231)
T PRK13849         68 -ELP------LLEAAYED----AELQGFDYALADTHGGSSELNNTII--ASSNLLLIPTMLTPLDIDEALSTYRYVIE  132 (231)
T ss_pred             -CHH------HHHHHHHH----HHHCCCCEEEECCCCCCCHHHHHHH--HHCCEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf             -525------78999988----7536998899818997758999999--97898997799986679999999999999