HHsearch alignment for GI: 254780831 and conserved domain: PRK13896
>PRK13896 cobyrinic acid a,c-diamide synthase; Provisional.
Probab=98.06 E-value=1.7e-05 Score=56.54 Aligned_cols=193 Identities=18% Similarity=0.229 Sum_probs=98.8
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCC-CCCEE-C-CCCCCCCCCCCCCCCCCCCCEEECCCCC
Q ss_conf 2010244666542578999989872357750698822467876-53100-0-2456311233445766322303223334
Q gi|254780831|r 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPS-IPKLL-K-ISGKVEISDKKFLKPKENYGIKIMSMAS 172 (341)
Q Consensus 96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps-~~~~l-g-~~~~~~~~~~~~i~p~~~~gi~~~s~g~ 172 (341)
T Consensus 2 kgilIAa~~SgsGKTtvt~gL~~aL~~rG~~Vq~FK~---GPDYIDP~~h~~a~G~~------------~~NLD~----~ 62 (432)
T PRK13896 2 DGVVLAGTSSGVGKTVATLAVLQALADAGYDVQPAKA---GPDFIDPSHHEAVVDTP------------SRSLDP----W 62 (432)
T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCC---CCCCCCHHHHHHHHCCC------------CCCCCH----H
T ss_conf 6289977899998999999999999978496376666---84751989999996898------------446891----0
Q ss_pred CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCC-CCHHHHCCCC--CCEEEEECCCCCHHHHH--HHH
Q ss_conf 355221000134202478999867521377758997455644421-0000000223--40267421443113456--667
Q gi|254780831|r 173 LVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDA-HLTIAQKIPL--SGVVIVSTPQDLALIDV--KRA 247 (341)
Q Consensus 173 l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~-~lsl~~~~~~--~~~iiVttP~~~s~~da--~r~ 247 (341)
T Consensus 63 m~~~~------------~v~~~~~~---~~aDiaviEGvMGLyDG~~~Sta~lA~~l~~PVvLVvd~~~~~~s~aA~v~G 127 (432)
T PRK13896 63 LSGED------------GMRRTYWR---GTGDVCVVEGMMGLYDGTVASTAAVAEELDLPVVLVVDAKAGMESVAATALG 127 (432)
T ss_pred HCCHH------------HHHHHHHH---CCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
T ss_conf 18989------------99999972---7998699961232457887758999998499989999332018889999999
Q ss_pred HHHHHCC---CCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCC-CCCEEEECCCC
Q ss_conf 7764001---2211445544202458778866512477658999998479789882799899975028-82179977999
Q gi|254780831|r 248 ISMYQKM---NIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVRVLSDL-GIPIVVHNMNS 323 (341)
Q Consensus 248 ~~~~~~~---~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~~a~~~-g~P~v~~~p~s 323 (341)
T Consensus 128 ~~~f~~~~~~d~~iaGVIlN~----v--~s~rh~----~~l~~al~~-~i~vlG~lPr~~~l~lp~RHLGL--~~~~E~~ 194 (432)
T PRK13896 128 FQAYADRAGVDIDVAGVLAQR----A--HGGRHA----DGIRDALPD-ELTYFGRVPPRSDLEIPDRHLGL--HMGSEAP 194 (432)
T ss_pred HHHHCCCCCCCCEEEEEEECC----C--CCHHHH----HHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCC--CCCCCCC
T ss_conf 997241247652476688426----7--758899----999999870-89489884247778984102598--7333442
Q ss_pred HHHHHHHHHHHH
Q ss_conf 899999999999
Q gi|254780831|r 324 ATSEIYQEISDR 335 (341)
Q Consensus 324 ~~a~~~~~iA~~ 335 (341)
T Consensus 195 ~~~~~~~~~~~~ 206 (432)
T PRK13896 195 IDDDALDAAAAH 206 (432)
T ss_pred HHHHHHHHHHHH
T ss_conf 389999999864