HHsearch alignment for GI: 254780831 and conserved domain: TIGR00337
>TIGR00337 PyrG CTP synthase; InterPro: IPR004468 CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5 upstream of enolase in both beta (Nitrosomonas europaea) and gamma (Escherichia coli) subdivisions of Proteobacterium .; GO: 0003883 CTP synthase activity, 0006221 pyrimidine nucleotide biosynthetic process.
Probab=95.68 E-value=0.097 Score=31.59 Aligned_cols=131 Identities=24% Similarity=0.488 Sum_probs=79.4
Q ss_pred CCCEECCCCCCCC----CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECC-
Q ss_conf 4201024466654----25789999898723577506988224678765310002456311233445766322303223-
Q gi|254780831|r 95 KKFVAVASGKGGV----GKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYGIKIMS- 169 (341)
Q Consensus 95 ~~iiav~SgKGGV----GKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s- 169 (341)
T Consensus 4 ~KyifVT---GGV~SslGKGI~AAS~grLL~~~gl~Vt~iKiDPYi-------N~D-------pGTMsP~qHGEVFVt~D 66 (571)
T TIGR00337 4 MKYIFVT---GGVVSSLGKGITAASLGRLLKARGLKVTIIKIDPYI-------NID-------PGTMSPLQHGEVFVTDD 66 (571)
T ss_pred CEEEEEE---CCEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC-------CCC-------CCCCCCCCCCEEEEECC
T ss_conf 1179994---438504026789999999998558806576307755-------668-------76377863542788068
Q ss_pred -------CCC---CCCC-------------CCCCCC---CC----------CCHHHHHHHHHHHHCC-------CCCCEE
Q ss_conf -------334---3552-------------210001---34----------2024789998675213-------777589
Q gi|254780831|r 170 -------MAS---LVDE-------------NVAMIW---RG----------PMVQSAIMHMLHNVVW-------GQLDFL 206 (341)
Q Consensus 170 -------~g~---l~~~-------------~~~~~~---rg----------~~~~~~l~~~l~~~~w-------~~~D~l 206 (341)
T Consensus 67 G~EtDLDLGHYERFl~~~l~~~~NiTTGkIY~~Vi~kERkGdYLG~TVQiIPHiTnEIK~~I~~~A~~P~eDtG~~~Dv~ 146 (571)
T TIGR00337 67 GAETDLDLGHYERFLDTNLTRDNNITTGKIYSSVIEKERKGDYLGKTVQIIPHITNEIKDRIKRVAKKPVEDTGSGADVV 146 (571)
T ss_pred CCEECCCCCCCHHHCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEE
T ss_conf 87643666542122276677456610066899884103771214882798425546789999996037764567997479
Q ss_pred EEECCCCC-CCC------------------------CCHHHHCCCCCCE--EEEECCCCCHHHHHHH
Q ss_conf 97455644-421------------------------0000000223402--6742144311345666
Q gi|254780831|r 207 LIDMPPGT-GDA------------------------HLTIAQKIPLSGV--VIVSTPQDLALIDVKR 246 (341)
Q Consensus 207 iiD~ppG~-gd~------------------------~lsl~~~~~~~~~--iiVttP~~~s~~da~r 246 (341)
T Consensus 147 IvEiG-GTVGDIEs~PFLEAiRQ~~~e~G~Env~~iHvTL---VP~i~aagE~KTKPTQhSVKeLRs 209 (571)
T TIGR00337 147 IVEIG-GTVGDIESLPFLEAIRQLKKEVGRENVLFIHVTL---VPYIAAAGELKTKPTQHSVKELRS 209 (571)
T ss_pred EEEEC-CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEE---CCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 99837-7000003625899999999873898679998400---263144874787751278999986