HHsearch alignment for GI: 254780831 and conserved domain: TIGR00337

>TIGR00337 PyrG CTP synthase; InterPro: IPR004468 CTP synthase is involved in pyrimidine ribonucleotide/ribonucleoside metabolism. The enzyme catalyzes the reaction L-glutamine + H2O + UTP + ATP = CTP + phosphate + ADP + L-glutamate. The enzyme exists as a dimer of identical chains that aggregates as a tetramer. This gene has been found circa 500 bp 5 upstream of enolase in both beta (Nitrosomonas europaea) and gamma (Escherichia coli) subdivisions of Proteobacterium .; GO: 0003883 CTP synthase activity, 0006221 pyrimidine nucleotide biosynthetic process.
Probab=95.68  E-value=0.097  Score=31.59  Aligned_cols=131  Identities=24%  Similarity=0.488  Sum_probs=79.4

Q ss_pred             CCCEECCCCCCCC----CHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECC-
Q ss_conf             4201024466654----25789999898723577506988224678765310002456311233445766322303223-
Q gi|254780831|r   95 KKFVAVASGKGGV----GKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYGIKIMS-  169 (341)
Q Consensus        95 ~~iiav~SgKGGV----GKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s-  169 (341)
T Consensus         4 ~KyifVT---GGV~SslGKGI~AAS~grLL~~~gl~Vt~iKiDPYi-------N~D-------pGTMsP~qHGEVFVt~D   66 (571)
T TIGR00337         4 MKYIFVT---GGVVSSLGKGITAASLGRLLKARGLKVTIIKIDPYI-------NID-------PGTMSPLQHGEVFVTDD   66 (571)
T ss_pred             CEEEEEE---CCEECCCHHHHHHHHHHHHHHHCCCEEEEEEECCCC-------CCC-------CCCCCCCCCCEEEEECC
T ss_conf             1179994---438504026789999999998558806576307755-------668-------76377863542788068


Q ss_pred             -------CCC---CCCC-------------CCCCCC---CC----------CCHHHHHHHHHHHHCC-------CCCCEE
Q ss_conf             -------334---3552-------------210001---34----------2024789998675213-------777589
Q gi|254780831|r  170 -------MAS---LVDE-------------NVAMIW---RG----------PMVQSAIMHMLHNVVW-------GQLDFL  206 (341)
Q Consensus       170 -------~g~---l~~~-------------~~~~~~---rg----------~~~~~~l~~~l~~~~w-------~~~D~l  206 (341)
T Consensus        67 G~EtDLDLGHYERFl~~~l~~~~NiTTGkIY~~Vi~kERkGdYLG~TVQiIPHiTnEIK~~I~~~A~~P~eDtG~~~Dv~  146 (571)
T TIGR00337        67 GAETDLDLGHYERFLDTNLTRDNNITTGKIYSSVIEKERKGDYLGKTVQIIPHITNEIKDRIKRVAKKPVEDTGSGADVV  146 (571)
T ss_pred             CCEECCCCCCCHHHCCCCCCCCCCCEECHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEE
T ss_conf             87643666542122276677456610066899884103771214882798425546789999996037764567997479


Q ss_pred             EEECCCCC-CCC------------------------CCHHHHCCCCCCE--EEEECCCCCHHHHHHH
Q ss_conf             97455644-421------------------------0000000223402--6742144311345666
Q gi|254780831|r  207 LIDMPPGT-GDA------------------------HLTIAQKIPLSGV--VIVSTPQDLALIDVKR  246 (341)
Q Consensus       207 iiD~ppG~-gd~------------------------~lsl~~~~~~~~~--iiVttP~~~s~~da~r  246 (341)
T Consensus       147 IvEiG-GTVGDIEs~PFLEAiRQ~~~e~G~Env~~iHvTL---VP~i~aagE~KTKPTQhSVKeLRs  209 (571)
T TIGR00337       147 IVEIG-GTVGDIESLPFLEAIRQLKKEVGRENVLFIHVTL---VPYIAAAGELKTKPTQHSVKELRS  209 (571)
T ss_pred             EEEEC-CCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEE---CCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf             99837-7000003625899999999873898679998400---263144874787751278999986