HHsearch alignment for GI: 254780831 and conserved domain: TIGR00750

>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=97.17  E-value=0.0031  Score=41.55  Aligned_cols=145  Identities=21%  Similarity=0.310  Sum_probs=83.8

Q ss_pred             CCCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCC-CCEECC-------C--CCCCCCCCCCCCCCCC
Q ss_conf             65420102446665425789999898723577506988224678765-310002-------4--5631123344576632
Q gi|254780831|r   93 NVKKFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSI-PKLLKI-------S--GKVEISDKKFLKPKEN  162 (341)
Q Consensus        93 ~~~~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~-~~~lg~-------~--~~~~~~~~~~i~p~~~  162 (341)
T Consensus        36 GnA~~vG~T-G~PGaGKSTl~~~l~~~lrRrG~~VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg~FIRs~pt  114 (333)
T TIGR00750        36 GNAHVVGIT-GVPGAGKSTLVEKLIMELRRRGLKVAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPGVFIRSMPT  114 (333)
T ss_pred             CCCEEEEEE-CCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCC
T ss_conf             790787664-6888857779999989997659768999887975975514545688775442222332289856767766


Q ss_pred             CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHH--HHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCH
Q ss_conf             23032233343552210001342024789998--6752137775899745564442100000002234026742144311
Q gi|254780831|r  163 YGIKIMSMASLVDENVAMIWRGPMVQSAIMHM--LHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLA  240 (341)
Q Consensus       163 ~gi~~~s~g~l~~~~~~~~~rg~~~~~~l~~~--l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s  240 (341)
T Consensus       115 rG~l----GG--------------ls~at~~~~~lldA~--G~DVI~vETV-GVGQSEVdi~~~a--DT~v~v~~pg~GD  171 (333)
T TIGR00750       115 RGSL----GG--------------LSKATRELVKLLDAA--GYDVILVETV-GVGQSEVDIINMA--DTFVVVTIPGTGD  171 (333)
T ss_pred             CCCH----HH--------------HHHHHHHHHHHHHHC--CCCEEEEEEE-CCCHHHHHHHHHH--CEEEEEECCCCCC
T ss_conf             6752----57--------------879999999999863--8987999841-5752487887341--5058985488783


Q ss_pred             HHHHHHHHHHHHCCCCCHHHHHHHHC
Q ss_conf             34566677764001221144554420
Q gi|254780831|r  241 LIDVKRAISMYQKMNIPIIGMIENMS  266 (341)
Q Consensus       241 ~~da~r~~~~~~~~~~~i~GiV~NMs  266 (341)
T Consensus       172 d~Q~iKaG~m-Eia--DI--~VVNKa  192 (333)
T TIGR00750       172 DVQGIKAGVM-EIA--DI--YVVNKA  192 (333)
T ss_pred             HHHHHHHHHH-EEE--EE--EEEECC
T ss_conf             4666654430-232--48--788168