HHsearch alignment for GI: 254780831 and conserved domain: TIGR01968

>TIGR01968 minD_bact septum site-determining protein MinD; InterPro: IPR010223 This entry describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. In Escherichia coli, the cell division site is determined by the cooperative activity of min operon products MinC, MinD, and MinE . MinD is a membrane-associated ATPase and is a septum site-determining factor through the activation and regulation of MinC and MinE. MinD is also known to undergo a rapid pole-to-pole oscillation movement in vivo as observed by fluorescent microscopy. In plants, chloroplast division requires the dimerisation of stromal MinD . The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.; GO: 0016887 ATPase activity, 0000918 selection of site for barrier septum formation.
Probab=100.00  E-value=8.1e-44  Score=312.02  Aligned_cols=227  Identities=26%  Similarity=0.442  Sum_probs=169.0

Q ss_pred             CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCC-----C------CCCCCCCCCCC
Q ss_conf             201024466654257899998987235775069882246787653100024563112-----3------34457663223
Q gi|254780831|r   96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEIS-----D------KKFLKPKENYG  164 (341)
Q Consensus        96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~-----~------~~~i~p~~~~g  164 (341)
T Consensus         2 ~viViTSGKGGVGKTTtTANlG~aLA~lG~kVvliD~DiGLRNLD~~lGLEnRivYt~vDVveG~C~l~qALikDKr~~N   81 (272)
T TIGR01968         2 RVIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADIGLRNLDLLLGLENRIVYTLVDVVEGECRLQQALIKDKRLEN   81 (272)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
T ss_conf             58999817889773589899999999619828999547570345777423103545355432484211001001267523


Q ss_pred             EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHH
Q ss_conf             03223334355221000134202478999867521377758997455644421000000022340267421443113456
Q gi|254780831|r  165 IKIMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALIDV  244 (341)
Q Consensus       165 i~~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~da  244 (341)
T Consensus        82 L~LLpAsQ~rdK~~--~~~E~~-~~lv~~Lk~~---~~FDYviIDcPAGIE--~GF~nAv~~Ad~AiVVttPEvsavRDA  153 (272)
T TIGR01968        82 LYLLPASQTRDKDA--VTPEQM-KKLVNELKEE---EHFDYVIIDCPAGIE--SGFRNAVAPADEAIVVTTPEVSAVRDA  153 (272)
T ss_pred             HHHHHHHHCCCCCC--CCHHHH-HHHHHHHHHC---CCCEEEEEECCCCHH--HHHHHHHHHCCEEEEEECCCCCCHHHH
T ss_conf             56636530236134--697789-9999998543---793079973787743--568998752683589877874510025


Q ss_pred             HHHHHHHHCCC-CCH------HHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCEE
Q ss_conf             66777640012-211------44554420245877886651247765899999847978988279989997502882179
Q gi|254780831|r  245 KRAISMYQKMN-IPI------IGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVRVLSDLGIPIV  317 (341)
Q Consensus       245 ~r~~~~~~~~~-~~i------~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~~a~~~g~P~v  317 (341)
T Consensus       154 DRvIGlLea~~~i~~~GEE~~~~LivNR---~rP~mV~~G~Ml---si~Dv~~~L~i~LiGviPeD~~iI~stN~GEP~v  227 (272)
T TIGR01968       154 DRVIGLLEAKGNIEEKGEEVKIKLIVNR---LRPEMVKKGDML---SIDDVLEILSIPLIGVIPEDEEIIVSTNKGEPVV  227 (272)
T ss_pred             HHHHHHHCCCCCCCCCCCEEEEEEEEEC---CCHHHHHCCCCC---CHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEE
T ss_conf             5675242124554457764643477851---564774168982---7899998608861686329986576645614354


Q ss_pred             EECCC-CHHHHHHHHHHHHHH
Q ss_conf             97799-989999999999999
Q gi|254780831|r  318 VHNMN-SATSEIYQEISDRIQ  337 (341)
Q Consensus       318 ~~~p~-s~~a~~~~~iA~~i~  337 (341)
T Consensus       228 l~~-~L~~~g~Af~~~ArRi~  247 (272)
T TIGR01968       228 LNK-KLSRAGKAFENIARRIL  247 (272)
T ss_pred             ECC-CCCHHHHHHHHHHHHHC
T ss_conf             460-02616788999987534