HHsearch alignment for GI: 254780831 and conserved domain: TIGR01968
>TIGR01968 minD_bact septum site-determining protein MinD; InterPro: IPR010223 This entry describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. In Escherichia coli, the cell division site is determined by the cooperative activity of min operon products MinC, MinD, and MinE . MinD is a membrane-associated ATPase and is a septum site-determining factor through the activation and regulation of MinC and MinE. MinD is also known to undergo a rapid pole-to-pole oscillation movement in vivo as observed by fluorescent microscopy. In plants, chloroplast division requires the dimerisation of stromal MinD . The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.; GO: 0016887 ATPase activity, 0000918 selection of site for barrier septum formation.
Probab=100.00 E-value=8.1e-44 Score=312.02 Aligned_cols=227 Identities=26% Similarity=0.442 Sum_probs=169.0
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCC-----C------CCCCCCCCCCC
Q ss_conf 201024466654257899998987235775069882246787653100024563112-----3------34457663223
Q gi|254780831|r 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEIS-----D------KKFLKPKENYG 164 (341)
Q Consensus 96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~-----~------~~~i~p~~~~g 164 (341)
T Consensus 2 ~viViTSGKGGVGKTTtTANlG~aLA~lG~kVvliD~DiGLRNLD~~lGLEnRivYt~vDVveG~C~l~qALikDKr~~N 81 (272)
T TIGR01968 2 RVIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADIGLRNLDLLLGLENRIVYTLVDVVEGECRLQQALIKDKRLEN 81 (272)
T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCHH
T ss_conf 58999817889773589899999999619828999547570345777423103545355432484211001001267523
Q ss_pred EEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHH
Q ss_conf 03223334355221000134202478999867521377758997455644421000000022340267421443113456
Q gi|254780831|r 165 IKIMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALIDV 244 (341)
Q Consensus 165 i~~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~da 244 (341)
T Consensus 82 L~LLpAsQ~rdK~~--~~~E~~-~~lv~~Lk~~---~~FDYviIDcPAGIE--~GF~nAv~~Ad~AiVVttPEvsavRDA 153 (272)
T TIGR01968 82 LYLLPASQTRDKDA--VTPEQM-KKLVNELKEE---EHFDYVIIDCPAGIE--SGFRNAVAPADEAIVVTTPEVSAVRDA 153 (272)
T ss_pred HHHHHHHHCCCCCC--CCHHHH-HHHHHHHHHC---CCCEEEEEECCCCHH--HHHHHHHHHCCEEEEEECCCCCCHHHH
T ss_conf 56636530236134--697789-9999998543---793079973787743--568998752683589877874510025
Q ss_pred HHHHHHHHCCC-CCH------HHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCEE
Q ss_conf 66777640012-211------44554420245877886651247765899999847978988279989997502882179
Q gi|254780831|r 245 KRAISMYQKMN-IPI------IGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVRVLSDLGIPIV 317 (341)
Q Consensus 245 ~r~~~~~~~~~-~~i------~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~~a~~~g~P~v 317 (341)
T Consensus 154 DRvIGlLea~~~i~~~GEE~~~~LivNR---~rP~mV~~G~Ml---si~Dv~~~L~i~LiGviPeD~~iI~stN~GEP~v 227 (272)
T TIGR01968 154 DRVIGLLEAKGNIEEKGEEVKIKLIVNR---LRPEMVKKGDML---SIDDVLEILSIPLIGVIPEDEEIIVSTNKGEPVV 227 (272)
T ss_pred HHHHHHHCCCCCCCCCCCEEEEEEEEEC---CCHHHHHCCCCC---CHHHHHHHCCCCCEEEECCCCCEEEEECCCEEEE
T ss_conf 5675242124554457764643477851---564774168982---7899998608861686329986576645614354
Q ss_pred EECCC-CHHHHHHHHHHHHHH
Q ss_conf 97799-989999999999999
Q gi|254780831|r 318 VHNMN-SATSEIYQEISDRIQ 337 (341)
Q Consensus 318 ~~~p~-s~~a~~~~~iA~~i~ 337 (341)
T Consensus 228 l~~-~L~~~g~Af~~~ArRi~ 247 (272)
T TIGR01968 228 LNK-KLSRAGKAFENIARRIL 247 (272)
T ss_pred ECC-CCCHHHHHHHHHHHHHC
T ss_conf 460-02616788999987534