HHsearch alignment for GI: 254780831 and conserved domain: TIGR01969

>TIGR01969 minD_arch cell division ATPase MinD; InterPro: IPR010224 Proper placement of the bacterial cell division site requires the site-specific inactivation of other potential division sites. In Escherichia coli, selection of the correct mid-cell site is mediated by the MinC, MinD and MinE proteins. Several members of this family are found in archaeal genomes but their function is uncharacterised. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. This entry represents the archaeal MinD family. The exact roles of the various archaeal MinD homologs are unknown. .
Probab=100.00  E-value=0  Score=353.09  Aligned_cols=223  Identities=26%  Similarity=0.419  Sum_probs=178.0

Q ss_pred             CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCC-----CCCCC---CCCCCC-EE
Q ss_conf             2010244666542578999989872357750698822467876531000245631123-----34457---663223-03
Q gi|254780831|r   96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISD-----KKFLK---PKENYG-IK  166 (341)
Q Consensus        96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~-----~~~i~---p~~~~g-i~  166 (341)
T Consensus         1 r~I~iASGKGGtGKTT~tANLgVALA~~Gk~V~~~DADI~MANL~LiLgmE~~~VTLhDVLAGeA~i~DAIY~gp~GnV~   80 (258)
T TIGR01969         1 RIITIASGKGGTGKTTITANLGVALAKLGKKVLVLDADITMANLELILGMEDKPVTLHDVLAGEADIKDAIYEGPEGNVK   80 (258)
T ss_pred             CEEEEEECCCCCCHHHEEEHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCEE
T ss_conf             98899977889861400000778898609768999467667768988446888967522134456100110028898447


Q ss_pred             ECCCCCCCCCC-CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHHHHH
Q ss_conf             22333435522-10001342024789998675213777589974556444210000000223402674214431134566
Q gi|254780831|r  167 IMSMASLVDEN-VAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALIDVK  245 (341)
Q Consensus       167 ~~s~g~l~~~~-~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~da~  245 (341)
T Consensus        81 V~PagvSLEg~rKA~~-------~~L~dV~~~i~-~~~D~lLIDAPAGL~~~a~--~Al~~a~elLLVvNPEi~SItDaL  150 (258)
T TIGR01969        81 VIPAGVSLEGLRKADP-------DKLEDVLKEII-DDTDFLLIDAPAGLERDAV--TALAAADELLLVVNPEISSITDAL  150 (258)
T ss_pred             EECCCCCHHHCCCCCH-------HHHHHHHHHHH-CCCCEEEEECCCCCCHHHH--HHHHHCCCCEEEECCCHHHHHHHH
T ss_conf             8506122100012683-------33289999872-0437788747898337899--999861866486676544677788


Q ss_pred             HHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCCEEEECCCCHHHHHHHCCCCCEEEECCCCHH
Q ss_conf             67776400122114455442024587788665124776589999984797898827998999750288217997799989
Q gi|254780831|r  246 RAISMYQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIPFLESVPFDMDVRVLSDLGIPIVVHNMNSAT  325 (341)
Q Consensus       246 r~~~~~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~~lg~IP~d~~i~~a~~~g~P~v~~~p~s~~  325 (341)
T Consensus       151 K~k~va~~lGt~ilG~vlNRv~------~~~tel-~~~eiE~i---LevPVl~~vPEDP~VR~AAa~G~P~V~~~P~SpA  220 (258)
T TIGR01969       151 KVKIVAEKLGTAILGVVLNRVT------RDKTEL-GREEIEAI---LEVPVLGVVPEDPEVRRAAAFGEPVVVYSPNSPA  220 (258)
T ss_pred             HHHHHHHHCCCCEEEEEEEECC------CCCCCC-CHHHHHHH---HCCCEEEEECCCHHHHHHHHCCCCEEEECCCCHH
T ss_conf             9999987608832468996023------666637-88899988---4797389856984344564248536884799878


Q ss_pred             HHHHHHHHHHHHH
Q ss_conf             9999999999999
Q gi|254780831|r  326 SEIYQEISDRIQQ  338 (341)
Q Consensus       326 a~~~~~iA~~i~~  338 (341)
T Consensus       221 A~A~~eLA~~l~G  233 (258)
T TIGR01969       221 AQAFMELAAELAG  233 (258)
T ss_pred             HHHHHHHHHHHHC
T ss_conf             9999999999718