HHsearch alignment for GI: 254780831 and conserved domain: TIGR02159
>TIGR02159 PA_CoA_Oxy4 phenylacetate-CoA oxygenase, PaaJ subunit; InterPro: IPR011883 Phenylacetate-CoA oxygenase is comprised of a five gene complex responsible for the hydroxylation of phenylacetate-CoA (PA-CoA) as the second catabolic step in phenylacetic acid (PA) degradation , . Although the exact function of this enzyme has not been determined, it has been shown to be required for phenylacetic acid degradation and has been proposed to function in a multicomponent oxygenase acting on phenylacetate-CoA . .
Probab=99.19 E-value=7.1e-11 Score=92.44 Aligned_cols=76 Identities=11% Similarity=0.110 Sum_probs=69.7
Q ss_pred CCCCCCCC-CEEECCCEEEEEEECCEEEEE-EEECCCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCC
Q ss_conf 33847976-436358765569889989999-99668784789999999999986067634235503222343332223
Q gi|254780831|r 16 LSIPGEKN-NIVEMQRLSEIFIVHNTVYLS-ITVPHTIAHQLQSLRSNAQQIIQNIPTVKNAVVTLTENKNPPQQRNN 91 (341)
Q Consensus 16 V~DPel~~-dIv~lGlI~~I~I~~~~V~i~-l~lt~~~cp~~~~l~~~i~~~l~~i~gv~~v~V~lt~~~~~~~~~~~ 91 (341)
T Consensus 1 VPDPEiPv~s~~DLGmVR~V~v~g~G~~v~s~tPTySGCPA~~~i~~~i~~A~~~~GW~~~VeV~~~L~P~WTTdwIT 78 (152)
T TIGR02159 1 VPDPEIPVVSVTDLGMVREVEVDGEGVVVKSFTPTYSGCPALEVIRQDIRDALRALGWVEEVEVKTSLDPAWTTDWIT 78 (152)
T ss_pred CCCCCCCEEEEECCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCC
T ss_conf 988887702211065343578647947988874587772368999999999997478975115887718987840027