HHsearch alignment for GI: 254780831 and conserved domain: TIGR03029
>TIGR03029 EpsG chain length determinant protein tyrosine kinase EpsG. The proteins in this family are homologs of the EpsG protein found in Methylobacillus strain 12S and are generally found in operons with other Eps homologs. The protein is believed to function as the protein tyrosine kinase component of the chain length regulator (along with the transmembrane component EpsF).
Probab=99.92 E-value=3.1e-25 Score=188.12 Aligned_cols=161 Identities=22% Similarity=0.395 Sum_probs=127.3
Q ss_pred CCCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCC--------CCCCCCCCCCCEE
Q ss_conf 42010244666542578999989872357750698822467876531000245631123--------3445766322303
Q gi|254780831|r 95 KKFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISD--------KKFLKPKENYGIK 166 (341)
Q Consensus 95 ~~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~--------~~~i~p~~~~gi~ 166 (341)
T Consensus 103 ~~~LaItS~~pGEGKS~vAaNLA~~~Aq~G~RvLLVDaDLRrP~lh~~f~l~~~~GLs~vL~g~~~l~~i~~~~~~~nL~ 182 (274)
T TIGR03029 103 RKALAVVSAKSGEGCSYIAANLAIVFSQLGEKTLLIDANLRDPVQHRNFKLSEQRGLSDILAGRSDLEVITHIPALENLS 182 (274)
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHCCCCCCCHHHHHCCCCCHHHEEECCCCCCEE
T ss_conf 83899968999998999999999999967991999958888844779759999768788845999889905158989978
Q ss_pred ECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCC--CCCCCHHHHCCCCCCEEEEECCCCCHHHHH
Q ss_conf 223334355221000134202478999867521377758997455644--421000000022340267421443113456
Q gi|254780831|r 167 IMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGT--GDAHLTIAQKIPLSGVVIVSTPQDLALIDV 244 (341)
Q Consensus 167 ~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~--gd~~lsl~~~~~~~~~iiVttP~~~s~~da 244 (341)
T Consensus 183 VLpaG~~pp-nP~eL----L~s~~~~~ll~~l~-~~yD~IIiDTPPvl~~sDA~i-la~--~aDg~LlVvR~~~T~~~~l 253 (274)
T TIGR03029 183 VLPAGAIPP-NPQEL----LARPAFTDLLNKVM-GDYDVVIVDTPSAEHSSDAQI-VAT--RARGTLIVSRVNETRLHEL 253 (274)
T ss_pred EEECCCCCC-CHHHH----HHHHHHHHHHHHHH-HHCCEEEEECCCCCCCCHHHH-HHH--HCCEEEEEEECCCCCHHHH
T ss_conf 996999998-97998----73589999999998-409999993898655434999-998--6897999996898889999
Q ss_pred HHHHHHHHCCCCCHHHHHHH
Q ss_conf 66777640012211445544
Q gi|254780831|r 245 KRAISMYQKMNIPIIGMIEN 264 (341)
Q Consensus 245 ~r~~~~~~~~~~~i~GiV~N 264 (341)
T Consensus 254 ~~a~~~L~~~g~~VlGvVLN 273 (274)
T TIGR03029 254 TSLKEHLSGVGVRVVGAVLN 273 (274)
T ss_pred HHHHHHHHHCCCCEEEEEEC
T ss_conf 99999999779966899848