HHsearch alignment for GI: 254780831 and conserved domain: cd02034

>cd02034 CooC The accessory protein CooC, which contains a nucleotide-binding domain (P-loop) near the N-terminus, participates in the maturation of the nickel center of carbon monoxide dehydrogenase (CODH). CODH from Rhodospirillum rubrum catalyzes the reversible oxidation of CO to CO2. CODH contains a nickel-iron-sulfur cluster (C-center) and an iron-sulfur cluster (B-center). CO oxidation occurs at the C-center. Three accessory proteins encoded by cooCTJ genes are involved in nickel incorporation into a nickel site. CooC functions as a nickel insertase that mobilizes nickel to apoCODH using energy released from ATP hydrolysis. CooC is a homodimer and has NTPase activities. Mutation at the P-loop abolishs its function.
Probab=99.57  E-value=1.2e-14  Score=117.62  Aligned_cols=115  Identities=25%  Similarity=0.319  Sum_probs=71.2

Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCC
Q ss_conf             10244666542578999989872357750698822467876531000245631123344576632230322333435522
Q gi|254780831|r   98 VAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKKFLKPKENYGIKIMSMASLVDEN  177 (341)
Q Consensus        98 iav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~~i~p~~~~gi~~~s~g~l~~~~  177 (341)
T Consensus         2 ia~-~GKGGvGKtt~~~~la~~l~~~g~~vl~iD~Dp--~dlpe~~~~~~--------------~~~~~l~~lg~~~~~g   64 (116)
T cd02034           2 IAI-TGKGGVGKTTIAALLARYLAEKGKPVLAIDADP--DDLPERLSVEV--------------GEIKLLLVMGMGRPGG   64 (116)
T ss_pred             EEE-ECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCC--CCCHHHHCEEC--------------CCCCEEEEEECCCCCC
T ss_conf             789-889977499999999999997899699998989--71235542331--------------7870799997343589


Q ss_pred             CCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEE
Q ss_conf             100013420247899986752137775899745564442100000002234026742
Q gi|254780831|r  178 VAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVS  234 (341)
Q Consensus       178 ~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVt  234 (341)
T Consensus        65 ~GC~---C~~n~ll~~~l~~l~~~~~~~VvvD~eAGi--EHl~Rg~~~~vD~livVs  116 (116)
T cd02034          65 EGCY---CPENALLNALLRHLVLTRDEQVVVDTEAGL--EHLGRGTAEGVDLLVVVN  116 (116)
T ss_pred             CCEE---CCHHHHHHHHHHHHCCCCCCEEEEECCCCH--HHHHCCHHHCCCEEEEEC
T ss_conf             9408---825789999999970679989999678548--777300664399999969