HHsearch alignment for GI: 254780831 and conserved domain: cd03116
>cd03116 MobB Molybdenum is an essential trace element in the form of molybdenum cofactor (Moco) which is associated with the metabolism of nitrogen, carbon and sulfur by redox active enzymes. In E. coli, the synthesis of Moco involves genes from several loci: moa, mob, mod, moe and mog. The mob locus contains mobA and mobB genes. MobB catalyzes the attachment of the guanine dinucleotide to molybdopterin.
Probab=95.33 E-value=0.025 Score=35.51 Aligned_cols=40 Identities=30% Similarity=0.463 Sum_probs=35.8
Q ss_pred CCEECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
Q ss_conf 20102446665425789999898723577506988224678
Q gi|254780831|r 96 KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYG 136 (341)
Q Consensus 96 ~iiav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ 136 (341)
T Consensus 2 kii~iv-G~snSGKTTLi~kli~~l~~~G~~V~~iKH~~H~ 41 (159)
T cd03116 2 KVIGFV-GYSGSGKTTLLEKLIPALSARGLRVAVIKHDHHD 41 (159)
T ss_pred EEEEEE-ECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCC
T ss_conf 299999-6799999999999999999779859899734767