HHsearch alignment for GI: 254780831 and conserved domain: pfam01656

>pfam01656 CbiA CobQ/CobB/MinD/ParA nucleotide binding domain. This family consists of various cobyrinic acid a,c-diamide synthases. These include CbiA and CbiP from S.typhimurium, and CobQ from R. capsulatus. These amidases catalyse amidations to various side chains of hydrogenobyrinic acid or cobyrinic acid a,c-diamide in the biosynthesis of cobalamin (vitamin B12) from uroporphyrinogen III. Vitamin B12 is an important cofactor and an essential nutrient for many plants and animals and is primarily produced by bacteria. The family also contains dethiobiotin synthetases as well as the plasmid partitioning proteins of the MinD/ParA family.
Probab=99.97  E-value=3.4e-31  Score=227.92  Aligned_cols=194  Identities=23%  Similarity=0.368  Sum_probs=131.1

Q ss_pred             EECCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCC--------------CCCC-CCC
Q ss_conf             1024466654257899998987235775069882246787653100024563112334--------------4576-632
Q gi|254780831|r   98 VAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLKISGKVEISDKK--------------FLKP-KEN  162 (341)
Q Consensus        98 iav~SgKGGVGKSt~s~nLa~ala~~G~~V~liDaDi~~ps~~~~lg~~~~~~~~~~~--------------~i~p-~~~  162 (341)
T Consensus         1 Iav~s~KGGVGKTT~a~nLA~~la~~G~rVlliD~D~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (212)
T pfam01656         1 IAIAGTKGGVGKTTLAANLARALAKRGYRVLLIDLDPQANLTSSLGKGPDLIDVLKEGLEIVDAQPLQHIAAAIVPSRNL   80 (212)
T ss_pred             CEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHEEECCCCC
T ss_conf             98976899806999999999999978997899838999962588658764344444410101121002456422245555


Q ss_pred             CCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEEEEECCCCCHHH
Q ss_conf             23032233343552210001342024789998675213777589974556444210000000223402674214431134
Q gi|254780831|r  163 YGIKIMSMASLVDENVAMIWRGPMVQSAIMHMLHNVVWGQLDFLLIDMPPGTGDAHLTIAQKIPLSGVVIVSTPQDLALI  242 (341)
Q Consensus       163 ~gi~~~s~g~l~~~~~~~~~rg~~~~~~l~~~l~~~~w~~~D~liiD~ppG~gd~~lsl~~~~~~~~~iiVttP~~~s~~  242 (341)
T Consensus        81 ~~l~l~p~~~~~~~--------~~~~~~~~~~~~~~~~~~~D~viiD~pp~~~~~--~~~al~~ad~vivv~~p~~~sl~  150 (212)
T pfam01656        81 DPLLLIPSNLSLAN--------FESELILEGGEEGLIKLAYDYVIIDGAPGLGEL--TANALVAADILVVPIEPEGVAVL  150 (212)
T ss_pred             CCEEEECCCHHHHH--------HHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH--HHHHHHCCCEEEEEECCCHHHHH
T ss_conf             87465335015667--------777779999998766604998999479975599--99999839989999489769999


Q ss_pred             HHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEEECCCCCHHHHHHHHHCCC---EEEECCCCHHHHH
Q ss_conf             56667776400122114455442024587788665124776589999984797---8988279989997
Q gi|254780831|r  243 DVKRAISMYQKMNIPIIGMIENMSYFLASDTGKKYDLFGNGGARFEAEKIGIP---FLESVPFDMDVRV  308 (341)
Q Consensus       243 da~r~~~~~~~~~~~i~GiV~NMs~~~~~~~~~~~~~fg~~~~~~~a~~~~i~---~lg~IP~d~~i~~  308 (341)
T Consensus       151 ~~~~l~~~~~~l~~~~~gvV~N~~-----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~Ip~d~~v~~  212 (212)
T pfam01656       151 GAQRLLELVERLGLKILGVVLNKV-----DRGDERHL--DKEIEALERKTGIPVLLLLGVIPRDLALSE  212 (212)
T ss_pred             HHHHHHHHHHHCCCCCEEEEECCC-----CCCCHHHH--HHHHHHHHHHHCCCCEEEECCCCCCCCCCC
T ss_conf             999999999985996229999148-----89983663--078999999978997514041168776687