RPSBLAST alignment for GI: 254780831 and conserved domain: TIGR01007

>gnl|CDD|130080 TIGR01007, eps_fam, capsular exopolysaccharide family. This model describes the capsular exopolysaccharide proteins in bacteria. The exopolysaccharide gene cluster consists of several genes which encode a number of proteins which regulate the exoploysaccharide biosynthesis(EPS). Atleast 13 genes espA to espM in streptococcus species seem to direct the EPS proteins and all of which share high homology. Functional roles were characterized by gene disruption experiments which resulted in exopolysaccharide-deficient phenotypes. Length = 204
 Score = 49.4 bits (118), Expect = 1e-06
 Identities = 47/189 (24%), Positives = 81/189 (42%), Gaps = 38/189 (20%)

Query: 96  KFVAVASGKGGVGKSTTVVNIACALKNKGKNVAILDADVYGPSIPKLLK----------- 144
           K + + S K G GKSTT  NIA A    G    ++D D+    +    K           
Sbjct: 18  KVLLITSVKPGEGKSTTSANIAVAFAQAGYKTLLIDGDMRNSVMSGTFKSQNKITGLTNF 77

Query: 145 ISGKVEISDKKFLKPKENYGIKIMSMASLVDENVAMIWRGP-------MVQSAIMHMLHN 197
           +SG  ++SD           I   ++     EN+ +I  GP       ++QS+    L  
Sbjct: 78  LSGTTDLSD----------AICDTNI-----ENLFVITSGPVPPNPTELLQSSNFKTLIE 122

Query: 198 VVWGQLDFLLIDMPP-GT-GDAHLTIAQKIPLSGVVIVSTPQDLALIDVKRAISMYQKMN 255
            +    D+++ID PP GT  DA + IA+       ++V+   ++   DV++A    ++  
Sbjct: 123 TLRKYFDYIIIDTPPIGTVTDAAI-IARAC--DASILVTDAGEIKKRDVQKAKEQLEQTG 179

Query: 256 IPIIGMIEN 264
              +G++ N
Sbjct: 180 SNFLGVVLN 188