HHsearch alignment for GI: 254780832 and conserved domain: PRK11049

>PRK11049 D-alanine/D-serine/glycine permease; Provisional.
Probab=99.28  E-value=1.5e-07  Score=66.98  Aligned_cols=298  Identities=15%  Similarity=0.121  Sum_probs=152.1

Q ss_pred             HHHHHHHHCCCEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
Q ss_conf             59998973230457367667899999714777777778993462048889899999999999998874107899813899
Q gi|254780832|r   15 PFYLMFESIGVVYGDIGTSVLYAFKEALKTTTMNHTLLVERTEVIGLVSLMIWVLTIVVTIKYILLLLRADNDGEGGILS   94 (628)
Q Consensus        15 ~~~l~~~alGvV~GDIGTSPLY~~~~~~~~~~~~~~~~~~~~~v~G~lSli~Wtl~liv~vKYv~~~l~adn~GEGGi~a   94 (628)
T Consensus        24 ~~~l~~i~iG~~---IGtGiF~~~g~a~~~aG--------P~~ll~--~~i~g~i~~~~~~~~aEl~~~~P~~G--~~--   86 (469)
T PRK11049         24 NRHIQLIAIGGA---IGTGLFMGSGKTISLAG--------PSIIFV--YMIIGFMLFFVMRAMGELLLSNLEYK--SF--   86 (469)
T ss_pred             HHHHHHHHHHHH---HHHHHHHHHHHHHHHHC--------HHHHHH--HHHHHHHHHHHHHHHHHHHHHCCCCC--CH--
T ss_conf             889999999989---99999999899999859--------599999--99999999999999999998668877--49--


Q ss_pred             HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999872675542577899999999965003469999999872466427366761289999999999975000189999
Q gi|254780832|r   95 LLALLLKKIPKRSTVLIALGLAGSALFIGDSMVTPALSVLSAVEGVRYIAPELDNFIILIALGILVLLFMLQSHGTKGVA  174 (628)
Q Consensus        95 L~sl~~~~~~~~~~~~~~~gligaa~ll~D~iLTpAISVlSavegl~~~~P~l~~~~v~iai~il~~Lf~iq~rGt~~~g  174 (628)
T Consensus        87 -~~y~~~~~G~------~~Gf~~GW~~~~~~~~~~~~~~~a~~~~~~~~~p~~~~~~~--~~~~~~~~~~inl~~v~~~g  157 (469)
T PRK11049         87 -SDFASDLLGP------WAGYFTGWTYWFCWVVTGIADVVAITAYAQFWFPDLSDWVA--SLAVVLLLLSLNLATVKMFG  157 (469)
T ss_pred             -HHHHHHHHCH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH--HHHHHHHHHHHHHHHHHHHH
T ss_conf             -9999999684------89999999999999999999999999999983586517899--99999999999999999999


Q ss_pred             HH---HHHHHHHHHHHHHHHHHHHHHC---CCCCCC-CCCHHHHHHHHHHCCHHHH-HHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf             98---4599999999999999986501---874444-6796899999983743589-99989999851087874364546
Q gi|254780832|r  175 CF---FSPIMVAWLLMITVSGLIHISD---DWGILA-AFNPMYALHMVFGKGTISL-VVLGSVFLTITGAEALYADLGHF  246 (628)
Q Consensus       175 ~~---F~pi~~lwf~~i~~~gi~~i~~---~p~vl~-a~~P~~~~~~~~~~~~~g~-~~lg~v~La~TG~EAl~advghF  246 (628)
T Consensus       158 ~~e~~~~~iKi~~i~~~ii~g~~~~~~~~~~p~~~~~~~~~~~~~~g~~p~G~~g~~~a~~~~~faf~G~e~i~~~A~E~  237 (469)
T PRK11049        158 EMEFWFAMIKIVAIVALIVVGLVMVAMHFQSPTGVEASFAHLWNDGGMFPKGISGFFAGFQIAVFAFVGIELVGTTAAET  237 (469)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf             99999999999999999999999985046788877676544577898786545899999999999943789999999995


Q ss_pred             CCHH--HHHHHHHHHHHHHHHHHHHHHHHH-CCH----HHHHHHHHH----HCCCCHHHHHHHHHHHHHHHHCCC-CCCC
Q ss_conf             7116--999999999999999974786873-592----455203687----278632899999999999996030-1002
Q gi|254780832|r  247 GRKP--IQYAWMVIFPALAINYLGQGALVL-SNP----EAIKDPFYM----MFGGWFLPFAVLTATCATVIASQA-VITG  314 (628)
Q Consensus       247 ~~~~--i~~aw~~v~~~L~l~y~Gq~a~ll-~~~----~~~~~~f~~----~~p~~~~~~~v~~at~a~iIaSqa-~isg  314 (628)
T Consensus       238 knP~r~iP~ai~~~~~~i~i~Yv~~~~~~~~~~p~~~~~~~~sP~~~~~~~~g~~~~~~-ii~~~~l~s~~s~~n~~~~~  316 (469)
T PRK11049        238 KDPEKSLPRAINSIPIRIIMFYVFALIVIMSVTPWSSVVPDKSPFVELFVLVGLPAAAS-VINFVVLTSAASSANSGVFS  316 (469)
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_conf             18765699999999999999999999999710677652777672999999929806999-99999999999999999999


Q ss_pred             HHHHHHHHHHCCCCCCEEEEECCCCC
Q ss_conf             58999999975998865687038876
Q gi|254780832|r  315 TFSLARQAIHLGFLPRMKIFFTSETF  340 (628)
Q Consensus       315 ~Fsl~~qai~l~~~Pr~~i~~tS~~~  340 (628)
T Consensus       317 ~sR~lyamar~G~lP~~-f~~~~k~g  341 (469)
T PRK11049        317 TSRMLFGLAQEGVAPKA-FAKLSKRA  341 (469)
T ss_pred             HHHHHHHHHCCCCCCHH-HHHCCCCC
T ss_conf             99999998708997789-87549999