HHsearch alignment for GI: 254780833 and conserved domain: COG1240

Probab=99.59  E-value=1.3e-13  Score=100.52  Aligned_cols=171  Identities=19%  Similarity=0.260  Sum_probs=138.1

Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEEC-CCCEEECCCCCCHHHHHH
Q ss_conf             1346740699852763115667872148989999987500233555531104798788636-741781666558789999
Q gi|254780833|r  164 KSDIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFS-SKIVQTFPLAWGVQHIQE  242 (371)
Q Consensus       164 ~~~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~-~~~~~~~~lt~~~~~~~~  242 (371)
T Consensus        74 ~~r~g~lvvfvVDASgSM~~~-----~Rm~aaKG~~~~lL~dA-----Yq~RdkvavI~F~G~~A~lll~pT~sv~~~~~  143 (261)
T COG1240          74 EGRAGNLIVFVVDASGSMAAR-----RRMAAAKGAALSLLRDA-----YQRRDKVAVIAFRGEKAELLLPPTSSVELAER  143 (261)
T ss_pred             CCCCCCCEEEEEECCCCCHHH-----HHHHHHHHHHHHHHHHH-----HHCCCEEEEEEECCCCCEEEECCCCCHHHHHH
T ss_conf             047677489999476542057-----89999999999999999-----97035489999637765388478653999999


Q ss_pred             HHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCH--HHHHHHHHHHHHCCCEEE
Q ss_conf             974015688745642378899998742110123467776661699998404588888897--899999999997898799
Q gi|254780833|r  243 KINRLIFGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDN--KESLFYCNEAKRRGAIVY  320 (371)
Q Consensus       243 ~i~~l~~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~--~~~~~~c~~~k~~gi~i~  320 (371)
T Consensus       144 ~L~~l~~GG~TPL~~aL~~a~ev~~r~~-------r~~p~~~~~~vviTDGr~n~~~~~~~~~e~~~~a~~~~~~g~~~l  216 (261)
T COG1240         144 ALERLPTGGKTPLADALRQAYEVLAREK-------RRGPDRRPVMVVITDGRANVPIPLGPKAETLEAASKLRLRGIQLL  216 (261)
T ss_pred             HHHHCCCCCCCCHHHHHHHHHHHHHHHH-------CCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEE
T ss_conf             9983899998843999999999999751-------048876538999737965888898657799999999852688479


Q ss_pred             EEEECCCCC-HHHHHHHC--CCCEEEEECCHHHH
Q ss_conf             999418642-79899833--89808982898999
Q gi|254780833|r  321 AIGVQAEAA-DQFLKNCA--SPDRFYSVQNSRKL  351 (371)
Q Consensus       321 tIg~~~~~~-~~~l~~cA--s~~~~y~~~~~~~L  351 (371)
T Consensus       217 vid~e~~~~~~g~~~~iA~~~Gg~~~~L~~l~~~  250 (261)
T COG1240         217 VIDTEGSEVRLGLAEEIARASGGEYYHLDDLSDD  250 (261)
T ss_pred             EEECCCCCCCCCHHHHHHHHHCCEEEECCCCCCH
T ss_conf             9955785233447999999739907865556404