HHsearch alignment for GI: 254780833 and conserved domain: TIGR00873
>TIGR00873 gnd 6-phosphogluconate dehydrogenase, decarboxylating; InterPro: IPR006113 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) , . Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved . The protein is a homodimer in which the monomers act independently : each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet . NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket . This model does not specify whether the cofactor is NADP only, NAD only, or both.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0050661 NADP binding, 0006098 pentose-phosphate shunt.
Probab=95.52 E-value=0.036 Score=31.48 Aligned_cols=46 Identities=20% Similarity=0.325 Sum_probs=36.6
Q ss_pred CCCCCEEEEEEECCCCC--C-------------------CCCCHHHHHHHHHHHHHCCCEEEEEEEC
Q ss_conf 76661699998404588--8-------------------8889789999999999789879999941
Q gi|254780833|r 280 HDDYKKYIIFLTDGENS--S-------------------PNIDNKESLFYCNEAKRRGAIVYAIGVQ 325 (371)
Q Consensus 280 ~~~~~k~ivl~TDG~~~--~-------------------~~~~~~~~~~~c~~~k~~gi~i~tIg~~ 325 (371)
T Consensus 61 Le~PRKImLMVkAG~pVdaD~~I~~L~P~LE~GDiIIDGGNS~Y~DT~RR~~eL~~~Gi~FvG~GvS 127 (480)
T TIGR00873 61 LERPRKIMLMVKAGAPVDADAVINSLLPLLEKGDIIIDGGNSHYKDTERRYKELKAKGILFVGVGVS 127 (480)
T ss_pred CCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEEE
T ss_conf 0688728887753885377899999644358998887588788466578999998649816730132