HHsearch results for GI: 254780833 and protein with PDBid: 1jey_B

>1jey_B KU80; double-strand DNA break repair, non-homologous END-joining, protein/nucleic acid complex, alpha/beta domain, beta barrel; HET: DNA; 2.50A {Homo sapiens} SCOP: b.131.1.2 c.62.1.4 PDB: 1jeq_B*
Probab=98.69  E-value=7.9e-07  Score=58.26  Aligned_cols=146  Identities=14%  Similarity=0.088  Sum_probs=97.7

Q ss_pred             CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCC--------------CEEECCCCC
Q ss_conf             069985276311566787214898999998750023355553110479878863674--------------178166655
Q gi|254780833|r  170 DMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSK--------------IVQTFPLAW  235 (371)
Q Consensus       170 di~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~--------------~~~~~~lt~  235 (371)
                      .+++++|.|+||.....+..++++.+++++..++...-..   ....++|++.|+..              .....|+..
T Consensus         9 aiv~~iDvs~sM~~~~~~~~s~~~~a~~~~~~~~~~ki~~---~~~D~vglvlfgt~~t~N~l~~~~~~~~i~v~~~l~~   85 (565)
T 1jey_B            9 AVVLCMDVGFTMSNSIPGIESPFEQAKKVITMFVQRQVFA---ENKDEIALVLFGTDGTDNPLSGGDQYQNITVHRHLML   85 (565)
T ss_dssp             EEEEEEECCGGGGCCBTTBCCHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESCSSCBSTTCTTTCSTTEEEEEEEEC
T ss_pred             EEEEEEECCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC---CCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEECCCC
T ss_conf             1999998986776768899997999999999999987338---9998799999805788875554457775599745889


Q ss_pred             -CHHHHHHHHHCCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHH
Q ss_conf             -878999997401568-874564237889999874211012346777666169999840458888889789999999999
Q gi|254780833|r  236 -GVQHIQEKINRLIFG-STTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAK  313 (371)
Q Consensus       236 -~~~~~~~~i~~l~~~-g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k  313 (371)
                       +...++...+.+.++ +.++...++.++..+|....       ...+..++.|||+|||.+..+.   .....+.+.++
T Consensus        86 ~~~~~l~~l~~~~~~~~~~~d~~~aL~va~~~l~~~~-------~~~k~~~~~Ivl~Td~~~p~~~---~~~~~i~~~l~  155 (565)
T 1jey_B           86 PDFDLLEDIESKIQPGSQQADFLDALIVSMDVIQHET-------IGKKFEKRHIEIFTDLSSRFSK---SQLDIIIHSLK  155 (565)
T ss_dssp             CCHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHS-------SSSCCSEEEEEEECCCCSCCCC---TTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH-------HCCCCCCEEEEEEECCCCCCCH---HHHHHHHHHHH
T ss_conf             9999999998653688778787999999999999875-------0255562489999279988687---89999999998


Q ss_pred             HCCCEEEEEEECCCC
Q ss_conf             789879999941864
Q gi|254780833|r  314 RRGAIVYAIGVQAEA  328 (371)
Q Consensus       314 ~~gi~i~tIg~~~~~  328 (371)
                      +.||.+..|++....
T Consensus       156 ~~~i~L~vi~~~~~~  170 (565)
T 1jey_B          156 KCDISLQFFLPFSLG  170 (565)
T ss_dssp             HTTEEEEEEESSCCC
T ss_pred             HCCCEEEEEECCCCC
T ss_conf             659669997036665