HHsearch results for GI: 254780833 and protein with PDBid: 1m2o_A
>1m2o_A SEC23, protein transport protein SEC23, SEC23P; zinc-finger, beta barrel, VWA domain, gelsolin domain,; HET: GNP; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1m2v_A 2qtv_A*
Probab=94.01 E-value=0.24 Score=25.20 Aligned_cols=170 Identities=13% Similarity=0.097 Sum_probs=94.7
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEEC----------------
Q ss_conf 7406998527631156678721489899999875002335555311047987886367417816----------------
Q gi|254780833|r 168 GLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTF---------------- 231 (371)
Q Consensus 168 ~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~---------------- 231 (371)
+.-.+||+|.|... ..++.+++.+...++.+.. ..++|+++|.......-
T Consensus 121 pp~~vFvID~s~~s--------~~l~~l~~sl~~~l~~lp~------~~~VglITf~~~v~~~~l~~~~~~~~~v~~g~~ 186 (768)
T 1m2o_A 121 PPIFFFVVDLTSET--------ENLDSLKESIITSLSLLPP------NALIGLITYGNVVQLHDLSSETIDRCNVFRGDR 186 (768)
T ss_dssp CCEEEEEEECCSCH--------HHHHHHHHHHHHHHHTSCT------TCEEEEEEESSEEEECCCSSSSSEEEEEEETTS
T ss_pred CCEEEEEEECCCCH--------HHHHHHHHHHHHHHHHCCC------CCEEEEEEECCEEEEEECCCCCCCCEEEECCCC
T ss_conf 98899999898656--------7899999999999961999------766999994787999988787766303632765
Q ss_pred -------------------------------------------CCCCCHHHHHHHHHCCCCCC---------CCCCCCHH
Q ss_conf -------------------------------------------66558789999974015688---------74564237
Q gi|254780833|r 232 -------------------------------------------PLAWGVQHIQEKINRLIFGS---------TTKSTPGL 259 (371)
Q Consensus 232 -------------------------------------------~lt~~~~~~~~~i~~l~~~g---------~T~~~~~~ 259 (371)
|+......+.+.++.+.... ......++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pl~e~~~~i~~lL~~L~~~~~~~~~~~~~~r~~g~Al 266 (768)
T 1m2o_A 187 EYQLEALTEMLTGQKPTGPGGAASHLPNAMNKVTPFSLNRFFLPLEQVEFKLNQLLENLSPDQWSVPAGHRPLRATGSAL 266 (768)
T ss_dssp CCCHHHHHHHHHSCCCC---------------CCSSSGGGGSEEHHHHHHHHHHHHHTCCCSCSCCCTTBCCCCCHHHHH
T ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH
T ss_conf 53177776554035666654332346763222355541112466999999999999875303556743245766507899
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCC------------HH---------------HHHHHHHHH
Q ss_conf 889999874211012346777666169999840458888889------------78---------------999999999
Q gi|254780833|r 260 EYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNID------------NK---------------ESLFYCNEA 312 (371)
Q Consensus 260 ~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~------------~~---------------~~~~~c~~~ 312 (371)
..+...+..... ..+ -.|++++.|.+|.|... .. --..+...+
T Consensus 267 ~~A~~ll~~~~~-----~~G-----grI~~f~sg~pt~GpG~l~~~~~~~~~rs~~d~~~~~~~~~~~a~~fY~~la~~~ 336 (768)
T 1m2o_A 267 NIASLLLQGCYK-----NIP-----ARIILFASGPGTVAPGLIVNSELKDPLRSHHDIDSDHAQHYKKACKFYNQIAQRV 336 (768)
T ss_dssp HHHHHHHHHHCT-----TSC-----CEEEEEESSCCCSSSSCCSCSBTTSCCCCHHHHHHTCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHC-----CCC-----CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH
T ss_conf 999999987506-----788-----7899992799987885341444344456644432101220451789999999999
Q ss_pred HHCCCEEEEEEECCCC-CHHHHHHHC--CCCEEEEECCH--HHHHHHHHHHHHH
Q ss_conf 9789879999941864-279899833--89808982898--9999999999996
Q gi|254780833|r 313 KRRGAIVYAIGVQAEA-ADQFLKNCA--SPDRFYSVQNS--RKLHDAFLRIGKE 361 (371)
Q Consensus 313 k~~gi~i~tIg~~~~~-~~~~l~~cA--s~~~~y~~~~~--~~L~~af~~I~~~ 361 (371)
.+.||.|-.+.+..+. +-..|+.|+ |+|..|..++. ..+.+.|....+.
T Consensus 337 ~~~~isvDiF~~s~~~~~l~~l~~l~~~TGG~v~~~~~f~~~~~~~~~~~~~~~ 390 (768)
T 1m2o_A 337 AANGHTVDIFAGCYDQIGMSEMKQLTDSTGGVLLLTDAFSTAIFKQSYLRLFAK 390 (768)
T ss_dssp HHHTCEEEEEEECSSCCSHHHHHHHHHHHTCCEEEESCTTSHHHHHHHHHTTCB
T ss_pred HHCCEEEEEEEECCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH
T ss_conf 878979999981487667186653775388509970777520128999999865