HHsearch results for GI: 254780833 and protein with PDBid: 1m2v_B
>1m2v_B SEC24, protein transport protein SEC24, SEC24P, SEC24 protein, abnormal nuclear; zinc-finger, beta barrel, VWA domain, gelsolin domain,; 2.75A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1
Probab=94.18 E-value=0.22 Score=25.41 Aligned_cols=175 Identities=15% Similarity=0.088 Sum_probs=98.6
Q ss_pred CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEE----------------
Q ss_conf 6740699852763115667872148989999987500233555531104798788636741781----------------
Q gi|254780833|r 167 IGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQT---------------- 230 (371)
Q Consensus 167 ~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~---------------- 230 (371)
.+.-.+|++|.|..-... .-+..+.+++...++.+.. .....++|+++|+......
T Consensus 302 ~pp~~vFvIDvS~~av~s-----g~l~~~~~~i~~~L~~l~~---~~~~~~VglItfd~~V~~y~l~~~~~~~~~~~~~~ 373 (926)
T 1m2v_B 302 PPATYCFLIDVSQSSIKS-----GLLATTINTLLQNLDSIPN---HDERTRISILCVDNAIHYFKIPLDSENNEESADQI 373 (926)
T ss_dssp CCCBEEEEEECSHHHHHS-----CHHHHHHHHHHHTTTTSCC---TTSCCEECEEEESSSEEEEECCCC---------CC
T ss_pred CCCEEEEEEECCHHHHHH-----HHHHHHHHHHHHHHHHCCC---CCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCC
T ss_conf 984899999898888777-----8999999999999974636---78773699999778489983577777643224675
Q ss_pred --------------------CCCCCCHHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf --------------------6665587899999740156------88745642378899998742110123467776661
Q gi|254780833|r 231 --------------------FPLAWGVQHIQEKINRLIF------GSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYK 284 (371)
Q Consensus 231 --------------------~~lt~~~~~~~~~i~~l~~------~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 284 (371)
.++...+..+.+.++.|.. ...+....++..+...+.. .++
T Consensus 374 ~~~~~~dl~~~f~p~~~~~l~~l~e~~~~i~~lL~~L~~~~~~~~~~~~~lG~Al~~a~~ll~~---------~gG---- 440 (926)
T 1m2v_B 374 NMMDIADLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGG---------VGG---- 440 (926)
T ss_dssp EEEEECCCSSCCCSCSSSSSEETTTTHHHHHHHHHHHHHHTSSCCCCCCCHHHHHHHHHHHHTT---------TCE----
T ss_pred CCCCCCCHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHC---------CCC----
T ss_conf 2024101454056787543433688799999999842564068888732399999999998754---------798----
Q ss_pred EEEEEEECCCCCCCCC-------------CHHH----------HHHHHHHHHHCCCEEEEEEECCC-CCHHHHHHHC--C
Q ss_conf 6999984045888888-------------9789----------99999999978987999994186-4279899833--8
Q gi|254780833|r 285 KYIIFLTDGENSSPNI-------------DNKE----------SLFYCNEAKRRGAIVYAIGVQAE-AADQFLKNCA--S 338 (371)
Q Consensus 285 k~ivl~TDG~~~~~~~-------------~~~~----------~~~~c~~~k~~gi~i~tIg~~~~-~~~~~l~~cA--s 338 (371)
.|+++++|-+|.|.. ..+. -..++..+.+.+|.|-.+.+..+ .+-..|..++ |
T Consensus 441 -kI~~f~sg~pt~G~G~l~~r~~~~~~~~~~e~~~~~~~~~~fY~~la~~~~~~~isvdlF~~~~~~~dla~l~~l~~~T 519 (926)
T 1m2v_B 441 -KIIVVSGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRFT 519 (926)
T ss_dssp -EEEEEESSCCCSSTTCCCCCCC----CCTTHHHHHTSCSSTHHHHHHHHHHHHTEEEEEEEEESSCCCHHHHHHHHHTT
T ss_pred -EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHCCEEEEEEEECCCCCCHHHHHHHHHHC
T ss_conf -6999947898778863422555333466034454246217999999999997790799998048767738877777634
Q ss_pred CCEEEEEC-----CHHHHHHHHHHHHHHHH
Q ss_conf 98089828-----98999999999999640
Q gi|254780833|r 339 PDRFYSVQ-----NSRKLHDAFLRIGKEMV 363 (371)
Q Consensus 339 ~~~~y~~~-----~~~~L~~af~~I~~~i~ 363 (371)
+|..|..+ ...+..+.+.++.+.++
T Consensus 520 GG~i~~y~~f~~~~~~d~~~l~~dl~~~~~ 549 (926)
T 1m2v_B 520 AGQTHFYPGFSGKNPNDIVKFSTEFAKHIS 549 (926)
T ss_dssp TCCEEEEESCCTTSHHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 855998178764436778999999997533