HHsearch results for GI: 254780833 and protein with PDBid: 1mjn_A

>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=99.58  E-value=1e-14  Score=105.93  Aligned_cols=169  Identities=18%  Similarity=0.264  Sum_probs=124.6

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCC--CHHHHHHHH
Q ss_conf             674069985276311566787214898999998750023355553110479878863674178166655--878999997
Q gi|254780833|r  167 IGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLAW--GVQHIQEKI  244 (371)
Q Consensus       167 ~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~--~~~~~~~~i  244 (371)
                      .|+|++|++|.|+||..      ++++.+++++..+++.+..     ...++++..|........++..  +...+...+
T Consensus         1 g~~DivfllD~S~Sm~~------~~f~~~k~~~~~~i~~l~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i   69 (179)
T 1mjn_A            1 GNVDLVFLFDGSMSLQP------DEFQKILDFMKDVMKKCSN-----TSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALL   69 (179)
T ss_dssp             CCEEEEEEEECBTTCCH------HHHHHHHHHHHHHHHHTTT-----SSEEEEEEEESSSEEEEECHHHHHHHCCHHHHH
T ss_pred             CCEEEEEEEECCCCCCH------HHHHHHHHHHHHHHHHHCC-----CCCEEEEEEEEECCEECCCCCCCCCHHHHHHHH
T ss_conf             97699999968899987------9999999999999997375-----776699999860211113521204699999987


Q ss_pred             HCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf             4015-688745642378899998742110123467776661699998404588888897899999999997898799999
Q gi|254780833|r  245 NRLI-FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIVYAIG  323 (371)
Q Consensus       245 ~~l~-~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i~tIg  323 (371)
                      +.+. .+|+++...++.++...+.....      ...+..+|++||+|||+++.+...          ++..++.+++++
T Consensus        70 ~~~~~~~g~~~~~~al~~a~~~~~~~~~------~~r~~~~k~ivllTDG~~~~~~~~----------~~~~~~~~~~~~  133 (179)
T 1mjn_A           70 KHVKHMLLLTNTFGAINYVATEVFREEL------GARPDATKVLIIITDGEATDSGNI----------DAAKDIIRYIIG  133 (179)
T ss_dssp             TTCCCCCBCCCHHHHHHHHHHHTSSGGG------TCCTTSEEEEEEEESSCCSSCSCC----------GGGTTSEEEEEE
T ss_pred             HHCCCCCCCCHHHHHHHHHHHHHHHHHH------CCCCCCCEEEEEECCCCCCCCHHH----------HHHHCCEEEEEE
T ss_conf             5125578983278899999999854530------689987148999807998860689----------998298688999


Q ss_pred             ECCCC----CHHHHHHHCCC---CEEEEECCHHHHHHHHHHHHHHH
Q ss_conf             41864----27989983389---80898289899999999999964
Q gi|254780833|r  324 VQAEA----ADQFLKNCASP---DRFYSVQNSRKLHDAFLRIGKEM  362 (371)
Q Consensus       324 ~~~~~----~~~~l~~cAs~---~~~y~~~~~~~L~~af~~I~~~i  362 (371)
                      ++...    +...|+.+|+.   .|+|.+++.++|.+.+++|.++|
T Consensus       134 i~~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~L~~~~~~l~~~I  179 (179)
T 1mjn_A          134 IGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLCTELQKKI  179 (179)
T ss_dssp             ESGGGCSHHHHHTTGGGSCSCHHHHEEEESSGGGSCCHHHHHHHHC
T ss_pred             EEECCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHC
T ss_conf             9946886017999999857998633998799999999999997249