HHsearch results for GI: 254780833 and protein with PDBid: 1mjn_A
>1mjn_A Integrin alpha-L; rossmann fold, immune system; 1.30A {Homo sapiens} SCOP: c.62.1.1 PDB: 3hi6_A 1mq8_B* 3eoa_I 3eob_I 1rd4_A* 1lfa_A 1zon_A 1zoo_A 1zop_A 1dgq_A 1xdd_A* 1xdg_A* 1xuo_A* 3e2m_A* 3bqn_B* 1cqp_A* 3bqm_B* 2ica_A* 2o7n_A* 3m6f_A* ...
Probab=99.58 E-value=1e-14 Score=105.93 Aligned_cols=169 Identities=18% Similarity=0.264 Sum_probs=124.6
Q ss_pred CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCCC--CHHHHHHHH
Q ss_conf 674069985276311566787214898999998750023355553110479878863674178166655--878999997
Q gi|254780833|r 167 IGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLAW--GVQHIQEKI 244 (371)
Q Consensus 167 ~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt~--~~~~~~~~i 244 (371)
.|+|++|++|.|+||.. ++++.+++++..+++.+.. ...++++..|........++.. +...+...+
T Consensus 1 g~~DivfllD~S~Sm~~------~~f~~~k~~~~~~i~~l~~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~i 69 (179)
T 1mjn_A 1 GNVDLVFLFDGSMSLQP------DEFQKILDFMKDVMKKCSN-----TSYQFAAVQFSTSYKTEFDFSDYVKRKDPDALL 69 (179)
T ss_dssp CCEEEEEEEECBTTCCH------HHHHHHHHHHHHHHHHTTT-----SSEEEEEEEESSSEEEEECHHHHHHHCCHHHHH
T ss_pred CCEEEEEEEECCCCCCH------HHHHHHHHHHHHHHHHHCC-----CCCEEEEEEEEECCEECCCCCCCCCHHHHHHHH
T ss_conf 97699999968899987------9999999999999997375-----776699999860211113521204699999987
Q ss_pred HCCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEE
Q ss_conf 4015-688745642378899998742110123467776661699998404588888897899999999997898799999
Q gi|254780833|r 245 NRLI-FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIVYAIG 323 (371)
Q Consensus 245 ~~l~-~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i~tIg 323 (371)
+.+. .+|+++...++.++...+..... ...+..+|++||+|||+++.+... ++..++.+++++
T Consensus 70 ~~~~~~~g~~~~~~al~~a~~~~~~~~~------~~r~~~~k~ivllTDG~~~~~~~~----------~~~~~~~~~~~~ 133 (179)
T 1mjn_A 70 KHVKHMLLLTNTFGAINYVATEVFREEL------GARPDATKVLIIITDGEATDSGNI----------DAAKDIIRYIIG 133 (179)
T ss_dssp TTCCCCCBCCCHHHHHHHHHHHTSSGGG------TCCTTSEEEEEEEESSCCSSCSCC----------GGGTTSEEEEEE
T ss_pred HHCCCCCCCCHHHHHHHHHHHHHHHHHH------CCCCCCCEEEEEECCCCCCCCHHH----------HHHHCCEEEEEE
T ss_conf 5125578983278899999999854530------689987148999807998860689----------998298688999
Q ss_pred ECCCC----CHHHHHHHCCC---CEEEEECCHHHHHHHHHHHHHHH
Q ss_conf 41864----27989983389---80898289899999999999964
Q gi|254780833|r 324 VQAEA----ADQFLKNCASP---DRFYSVQNSRKLHDAFLRIGKEM 362 (371)
Q Consensus 324 ~~~~~----~~~~l~~cAs~---~~~y~~~~~~~L~~af~~I~~~i 362 (371)
++... +...|+.+|+. .|+|.+++.++|.+.+++|.++|
T Consensus 134 i~~~~~~~~~~~~L~~ias~~~~~~~~~~~~~~~L~~~~~~l~~~I 179 (179)
T 1mjn_A 134 IGKHFQTKESQETLHKFASKPASEFVKILDTFEKLKDLCTELQKKI 179 (179)
T ss_dssp ESGGGCSHHHHHTTGGGSCSCHHHHEEEESSGGGSCCHHHHHHHHC
T ss_pred EEECCCCCCCHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHHC
T ss_conf 9946886017999999857998633998799999999999997249