HHsearch results for GI: 254780833 and protein with PDBid: 1pcx_A
>1pcx_A Protein transport protein SEC24; 2.50A {Saccharomyces cerevisiae} SCOP: a.71.2.1 b.2.8.1 c.62.1.2 d.109.2.1 g.41.10.1 PDB: 1pd0_A 1pd1_A
Probab=91.75 E-value=0.5 Score=23.22 Aligned_cols=177 Identities=15% Similarity=0.070 Sum_probs=99.4
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEE---------------
Q ss_conf 46740699852763115667872148989999987500233555531104798788636741781---------------
Q gi|254780833|r 166 DIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQT--------------- 230 (371)
Q Consensus 166 ~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~--------------- 230 (371)
..+.-.+|++|.|..-... .-+..+.+++...++.... .....++|+++|+......
T Consensus 185 p~pp~~vFvIDvS~~av~~-----g~l~~~~~~i~~~L~~lp~---~~~~~~Vg~Itfd~~v~~~~l~~~~~~~~~~~~~ 256 (810)
T 1pcx_A 185 PPPATYCFLIDVSQSSIKS-----GLLATTINTLLQNLDSIPN---HDERTRISILCVDNAIHYFKIPLDSENNEESADQ 256 (810)
T ss_dssp CCCCEEEEEEECSHHHHHH-----THHHHHHHHHHHHTTTSCC---TTSCCEEEEEEESSSEEEEECCCGGGC-------
T ss_pred CCCCEEEEEEECCHHHHHH-----HHHHHHHHHHHHHHHHCCC---CCCCEEEEEEEECCCEEEEECCCCCCCCCCCCCC
T ss_conf 9985899999897788664-----7999999999998751436---7876059999958828999656777764333344
Q ss_pred ---------------------CCCCCCHHHHHHHHHCCC---C---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf ---------------------666558789999974015---6---8874564237889999874211012346777666
Q gi|254780833|r 231 ---------------------FPLAWGVQHIQEKINRLI---F---GSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDY 283 (371)
Q Consensus 231 ---------------------~~lt~~~~~~~~~i~~l~---~---~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 283 (371)
.++...+..+...++.+. . ...+....+++.+...+.. .++
T Consensus 257 ~~~~~~~dl~~~f~p~~~~~lv~l~e~~~~i~~lL~~L~~~~~~~~~~~~alG~Al~~a~~ll~~---------~gG--- 324 (810)
T 1pcx_A 257 INMMDIADLEEPFLPRPNSMVVSLKACRQNIETLLTKIPQIFQSNLITNFALGPALKSAYHLIGG---------VGG--- 324 (810)
T ss_dssp CEEECCCCTTCC-----TTTSEETTTTHHHHHHHHHHHHHHTTTCCCCCCCHHHHHHHHHHHHTT---------TCE---
T ss_pred CCCCCCCCHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCHHHCCCCCCCCCHHHHHHHHHHHHHHC---------CCC---
T ss_conf 43244444233146787665120689799999999855453169888732299999999998745---------798---
Q ss_pred CEEEEEEECCCCCCCCCCH-----------------------HHHHHHHHHHHHCCCEEEEEEECCC-CCHHHHHHHC--
Q ss_conf 1699998404588888897-----------------------8999999999978987999994186-4279899833--
Q gi|254780833|r 284 KKYIIFLTDGENSSPNIDN-----------------------KESLFYCNEAKRRGAIVYAIGVQAE-AADQFLKNCA-- 337 (371)
Q Consensus 284 ~k~ivl~TDG~~~~~~~~~-----------------------~~~~~~c~~~k~~gi~i~tIg~~~~-~~~~~l~~cA-- 337 (371)
.|++++.|-+|.|...- .--..++..+.+.||.|-.+.+..+ .+-..|..++
T Consensus 325 --kI~~f~s~~pt~GpG~l~~r~~~~~~~~~~~~~~l~~~~~~fY~~la~~~~~~~isvDlF~~s~~~~dlatl~~l~~~ 402 (810)
T 1pcx_A 325 --KIIVVSGTLPNLGIGKLQRRNESGVVNTSKETAQLLSCQDSFYKNFTIDCSKVQITVDLFLASEDYMDVASLSNLSRF 402 (810)
T ss_dssp --EEEEEESSCCCSSTTCCCC--------------------CCHHHHHHHHHHHTTEEEEEEEEESSCCCHHHHHHHHHT
T ss_pred --EEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHH
T ss_conf --699995779867886321045544457734556532537899999999999879359998604777772888888874
Q ss_pred CCCEEEEE-----CCHHHHHHHHHHHHHHHHH
Q ss_conf 89808982-----8989999999999996400
Q gi|254780833|r 338 SPDRFYSV-----QNSRKLHDAFLRIGKEMVK 364 (371)
Q Consensus 338 s~~~~y~~-----~~~~~L~~af~~I~~~i~~ 364 (371)
|+|..|.- ....+..+.+.++.+.++.
T Consensus 403 TGG~v~~y~~F~~~~~~d~~~l~~dl~~~l~~ 434 (810)
T 1pcx_A 403 TAGQTHFYPGFSGKNPNDIVKFSTEFAKHISM 434 (810)
T ss_dssp TTCCEEEEETCCTTSHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 58469980686644345789999999986566