HHsearch results for GI: 254780833 and protein with PDBid: 1rrk_A
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.88 E-value=5.9e-22 Score=149.60 Aligned_cols=183 Identities=19% Similarity=0.226 Sum_probs=139.5
Q ss_pred CCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEECCCC----CCHHHHHHH
Q ss_conf 7406998527631156678721489899999875002335555311047987886367417816665----587899999
Q gi|254780833|r 168 GLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLA----WGVQHIQEK 243 (371)
Q Consensus 168 ~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~lt----~~~~~~~~~ 243 (371)
.+|++|++|.|+||+. ++++.+++++..+++.+... ...+|++++.|++.+....+++ .+...++..
T Consensus 1 ~lDivfvlD~S~Sm~~------~~~~~~k~~~~~~i~~~~~~---~~~~rv~lv~f~~~~~~~~~l~~~~~~~~~~~~~~ 71 (497)
T 1rrk_A 1 SMNIYLVLDGSDSIGA------SNFTGAKKVLVNLIEKVASY---GVKPRYGLVTYATYPKIWVKVSEADSSNADWVTKQ 71 (497)
T ss_dssp CEEEEEEEECSTTTCH------HHHHHHHHHHHHHHHHHHHT---TCCCEEEEEEESSSEEEEECTTSGGGGCHHHHHHH
T ss_pred CCCEEEEEECCCCCCH------HHHHHHHHHHHHHHHHCCCC---CCCEEEEEEEECCEEEEEECCCCCCCCCHHHHHHH
T ss_conf 9458999957799986------99999999999999853658---99609999998781789973798775689999999
Q ss_pred HHCCC-----CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHH---------
Q ss_conf 74015-----6887456423788999987421101234677766616999984045888888978999999---------
Q gi|254780833|r 244 INRLI-----FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYC--------- 309 (371)
Q Consensus 244 i~~l~-----~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c--------- 309 (371)
|+.+. .+++|++..|+.++.+.+...... ......+.+|+|||||||.+|.+.........+-
T Consensus 72 i~~i~~~~~~~~g~T~~~~al~~a~~~~~~~~~~---~~~~~~~~~~viillTDG~~n~~~~p~~~~~~i~~~~~~~~~~ 148 (497)
T 1rrk_A 72 LNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDV---PPEGWNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDR 148 (497)
T ss_dssp HHHCCGGGSCCTTCCCHHHHHHHHHHHHCCC---------CGGGCEEEEEEEECSCCCSSSCTHHHHHHHHHHTTCSSCC
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCC---CCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9608566886888757999999999998652014---7555567875999997976777898789999999878777777
Q ss_pred HHHHHCCCEEEEEEECCCCCHHHHHHHCC-C-C--EEEEECCHHHHHHHHHHHHHHH
Q ss_conf 99997898799999418642798998338-9-8--0898289899999999999964
Q gi|254780833|r 310 NEAKRRGAIVYAIGVQAEAADQFLKNCAS-P-D--RFYSVQNSRKLHDAFLRIGKEM 362 (371)
Q Consensus 310 ~~~k~~gi~i~tIg~~~~~~~~~l~~cAs-~-~--~~y~~~~~~~L~~af~~I~~~i 362 (371)
..++++||.||+||+|.+.+...|+.+|+ + + |||.+++.++|.++|..+.++-
T Consensus 149 ~~~~~~gi~i~~vgiG~~~d~~~L~~iAs~~~~~~~~f~~~d~~~L~~~~~~~~~~~ 205 (497)
T 1rrk_A 149 KNPREDYLDVYVFGVGPLVNQVNINALASKKDNEQHVCKVKDMECLEDVFYQMIDES 205 (497)
T ss_dssp -CCCGGGEEEEEEECSSSCCHHHHHHHSCCCTTCCCEEETTCHHHHHHHHHHHSCGG
T ss_pred HHHHHCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCC
T ss_conf 668767907999736886799999987517898504999499999999875302466