HHsearch results for GI: 254780833 and protein with PDBid: 2x5n_A
>2x5n_A SPRPN10, 26S proteasome regulatory subunit RPN10; nuclear protein, nucleus, ubiquitin; 1.30A {Schizosaccharomyces pombe}
Probab=99.71 E-value=3.9e-16 Score=114.48 Aligned_cols=152 Identities=12% Similarity=0.080 Sum_probs=119.1
Q ss_pred CEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCC-EEECCCCCCHHHHHHHHHCCC
Q ss_conf 0699852763115667872148989999987500233555531104798788636741-781666558789999974015
Q gi|254780833|r 170 DMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKI-VQTFPLAWGVQHIQEKINRLI 248 (371)
Q Consensus 170 di~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~-~~~~~lt~~~~~~~~~i~~l~ 248 (371)
.+++++|.|+||..... ..+|++.+++++..+++.+..... ..+++++.|.... ....+++.+...+...++.+.
T Consensus 4 a~viviD~S~SM~~~D~-~p~Rl~~ak~a~~~li~~~~~~~~---~~~vg~v~~~~~~~~~~~~~~~~~~~~~~~i~~l~ 79 (192)
T 2x5n_A 4 ATMILIDNSEWMINGDY-IPTRFEAQKDTVHMIFNQKINDNP---ENMCGLMTIGDNSPQVLSTLTRDYGKFLSAMHDLP 79 (192)
T ss_dssp EEEEEECCSGGGGCTTS-SSCHHHHHHHHHHHHHHHHHHHCT---TCEEEEEECCTTSCCEEEEEESCHHHHHHHHTTCC
T ss_pred EEEEEEECCHHHCCCCC-CCCHHHHHHHHHHHHHHHHHHCCC---CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 99999989855437898-978999999999999998764597---77499986057643014788408999998740234
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCC
Q ss_conf 68874564237889999874211012346777666169999840458888889789999999999789879999941864
Q gi|254780833|r 249 FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNIDNKESLFYCNEAKRRGAIVYAIGVQAEA 328 (371)
Q Consensus 249 ~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~TDG~~~~~~~~~~~~~~~c~~~k~~gi~i~tIg~~~~~ 328 (371)
++|+|++..|+..++..+... ......+.|+++|||..+. +......+++.+++.||+||+||||.+.
T Consensus 80 ~~G~T~l~~al~~A~~~l~~~---------~~~~~~~~iil~tdg~~~~---~~~~~~~~a~~~~~~~i~i~~Ig~G~~~ 147 (192)
T 2x5n_A 80 VRGNAKFGDGIQIAQLALKHR---------ENKIQRQRIVAFVGSPIVE---DEKNLIRLAKRMKKNNVAIDIIHIGELQ 147 (192)
T ss_dssp CCSCCCHHHHHHHHHHHHHTC---------SCTTSEEEEEEEECSCCSS---CHHHHHHHHHHHHHTTEEEEEEEESCC-
T ss_pred CCCCCCCCHHHHHHHHHHHHH---------HHCCCCEEEEEEECCCCCC---CHHHHHHHHHHHCCCCCEEEEEEEECCC
T ss_conf 468765227999999999862---------1104650699996889753---0678999999851357507999971767
Q ss_pred CHHHHHHHC
Q ss_conf 279899833
Q gi|254780833|r 329 ADQFLKNCA 337 (371)
Q Consensus 329 ~~~~l~~cA 337 (371)
+...|+.++
T Consensus 148 ~~~~l~~~~ 156 (192)
T 2x5n_A 148 NESALQHFI 156 (192)
T ss_dssp --CHHHHHH
T ss_pred CHHHHHHHH
T ss_conf 879999999