HHsearch results for GI: 254780833 and protein with PDBid: 3eh1_A

>3eh1_A Protein transport protein SEC24B; copii coat protein, vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum; 1.80A {Homo sapiens} PDB: 2nut_B 2nup_B 3egd_B 3egx_B
Probab=94.55  E-value=0.18  Score=25.89  Aligned_cols=174  Identities=17%  Similarity=0.098  Sum_probs=102.4

Q ss_pred             CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCCCEEE----------------
Q ss_conf             6740699852763115667872148989999987500233555531104798788636741781----------------
Q gi|254780833|r  167 IGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIVQT----------------  230 (371)
Q Consensus       167 ~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~----------------  230 (371)
                      .+.-.+|++|.|......     ..+..+.+++...++.....    ...++|+++|+......                
T Consensus       159 ~pp~~vfvID~S~~a~~~-----g~l~~~~~ai~~~l~~l~~~----~~~~VglItf~~~V~~~~~~~~~~~~~~~v~~d  229 (751)
T 3eh1_A          159 QPAVYLFVLDVSHNAVEA-----GYLTILCQSLLENLDKLPGD----SRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSD  229 (751)
T ss_dssp             CCCEEEEEEECSHHHHHH-----THHHHHHHHHHHHTTTSSCC----TTCEEEEEEESSSEEEEECCTTCSSCEEEEESC
T ss_pred             CCCEEEEEEECCHHHHHH-----HHHHHHHHHHHHHHHHCCCC----CCEEEEEEEECCEEEEEECCCCCCCCEEEEECC
T ss_conf             986899999896578661-----49999999999999747788----760899999899789984689866532674148


Q ss_pred             -------------CCCCCCHHHHHHHHHCCCC------CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEE
Q ss_conf             -------------6665587899999740156------887456423788999987421101234677766616999984
Q gi|254780833|r  231 -------------FPLAWGVQHIQEKINRLIF------GSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLT  291 (371)
Q Consensus       231 -------------~~lt~~~~~~~~~i~~l~~------~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~ivl~T  291 (371)
                                   .++......+...++.+..      ..++....|+..+...+..         .+     -.|++++
T Consensus       230 ~~~~~~p~~~~~l~~l~e~~~~i~~~L~~L~~~~~~~~~~~~~lg~Al~~a~~~l~~---------~g-----G~i~~f~  295 (751)
T 3eh1_A          230 IDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLMSP---------TG-----GRVSVFQ  295 (751)
T ss_dssp             TTCTTSCCGGGTSEETTTTHHHHHHHHHHGGGTSTTCSCCCCCHHHHHHHHHHHHTT---------TC-----EEEEEEE
T ss_pred             CCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH---------CC-----CEEEEEE
T ss_conf             631246787646843799899999999854554148877641089999999998873---------29-----7599995


Q ss_pred             CCCCCCCCCC----------------------HHHHHHHHHHHHHCCCEEEEEEECCCC-CHHHHHHHC--CCCEEEEEC
Q ss_conf             0458888889----------------------789999999999789879999941864-279899833--898089828
Q gi|254780833|r  292 DGENSSPNID----------------------NKESLFYCNEAKRRGAIVYAIGVQAEA-ADQFLKNCA--SPDRFYSVQ  346 (371)
Q Consensus       292 DG~~~~~~~~----------------------~~~~~~~c~~~k~~gi~i~tIg~~~~~-~~~~l~~cA--s~~~~y~~~  346 (371)
                      +|.+|.|...                      ..--..++..+.+.||.|-.+.+..+. +-..|..++  |+|..|.-+
T Consensus       296 ~g~pt~GpG~l~~~~~~~~~~~~~~~~~~~~~~~fY~~la~~~~~~~isvdif~~s~~~~~l~~l~~l~~~TGG~v~~~~  375 (751)
T 3eh1_A          296 TQLPSLGAGLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYP  375 (751)
T ss_dssp             CSCCCSSTTCCCCCCCSCGGGGSSSCTTCSCSCSHHHHHHHHHHHTTEEEEEEECCSSCCCHHHHTHHHHTTTCCEEECT
T ss_pred             CCCCCCCCCCEECCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHCCCCEEEEEC
T ss_conf             67997889832126676667854567651405789999999999769479999945877787998889864786599936


Q ss_pred             C------HHHHHHHHHHHHHHHH
Q ss_conf             9------8999999999999640
Q gi|254780833|r  347 N------SRKLHDAFLRIGKEMV  363 (371)
Q Consensus       347 ~------~~~L~~af~~I~~~i~  363 (371)
                      +      ..++...+.++.+.++
T Consensus       376 ~f~~~~~~~~~~~l~~dl~~~l~  398 (751)
T 3eh1_A          376 SFHYTHNPSQAEKLQKDLKRYLT  398 (751)
T ss_dssp             TCBTTTBHHHHHHHHHHHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHH
T ss_conf             86643365789999999998755