HHsearch results for GI: 254780833 and protein with PDBid: 3k6s_B
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=98.71 E-value=1.7e-08 Score=68.37 Aligned_cols=191 Identities=15% Similarity=0.202 Sum_probs=108.7
Q ss_pred EEECCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECCC-----------
Q ss_conf 221000134674069985276311566787214898999998750023355553110479878863674-----------
Q gi|254780833|r 158 SVKISSKSDIGLDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSK----------- 226 (371)
Q Consensus 158 ~~~~~~~~~~~idi~~viD~SgSm~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~----------- 226 (371)
........+.|+|+++++|.|+||.. .++.++.....+.+.+... ....|+|+-+|.++
T Consensus 94 ~~~~~~~~~~pvdly~lmd~s~sm~~-------d~~~~~~~~~~l~~~~~~~---t~~~~~g~g~fvdk~~~p~~~~~p~ 163 (687)
T 3k6s_B 94 NVTFRRAKGYPIDLYYLMDLSYSMLD-------DLRNVKKLGGDLLRALNEI---TESGRIGFGSFVDKTVLPFVNTHPD 163 (687)
T ss_dssp EEEECCCCCCCCEEEEEEECSSTTHH-------HHHTTTTCCTTHHHHHHSS---CCSCEEEEEEECCCSSTTSSCCSST
T ss_pred EEEEECCCCCCCEEEEEEECCCCHHH-------HHHHHHHHHHHHHHHHHHH---CCCCEEECCCCCCCCCCCCCCCCHH
T ss_conf 88875278898208999836741788-------9999999999999999863---8562760010123565875678877
Q ss_pred ------------------CEEECCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEE
Q ss_conf ------------------17816665587899999740156887456423788999987421101234677766616999
Q gi|254780833|r 227 ------------------IVQTFPLAWGVQHIQEKINRLIFGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYII 288 (371)
Q Consensus 227 ------------------~~~~~~lt~~~~~~~~~i~~l~~~g~T~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~iv 288 (371)
..-+++||.+.......++....+|+-...+|---|..+.. .=....++- +.+++||
T Consensus 164 ~~~~pc~~~~~~c~~~~~~~~~~~lt~~~~~f~~~~~~~~~~~n~d~pe~~~da~~q~~---~c~~~igwr--~~~~~~~ 238 (687)
T 3k6s_B 164 KLRNPCPNKEKECQPPFAFRHVLKLTNNSNQFQTEVGKQLISGNLDAPEGGLDAMMQVA---ACPEEIGWR--NVTRLLV 238 (687)
T ss_dssp TTTCCCCSCCCCCCCCCSCEEEEEEESCSHHHHHHHHTSCCCCCSSSSCCHHHHHHHHT---TCHHHHCCC--SSCCEEE
T ss_pred HHCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHEEEECCCCCCCCHHHHHHHHH---HCCCCCCCC--CCEEEEE
T ss_conf 70288878887767883415422566778999998751670357768650166888877---502223645--7548999
Q ss_pred EEECCCCCC--------------C-------------CCCHHHHHHHHHHHHHCCCE-EEEEEECCCCCHHHHHHHCCCC
Q ss_conf 984045888--------------8-------------88978999999999978987-9999941864279899833898
Q gi|254780833|r 289 FLTDGENSS--------------P-------------NIDNKESLFYCNEAKRRGAI-VYAIGVQAEAADQFLKNCASPD 340 (371)
Q Consensus 289 l~TDG~~~~--------------~-------------~~~~~~~~~~c~~~k~~gi~-i~tIg~~~~~~~~~l~~cAs~~ 340 (371)
|.||...+. + ..+.+...++-.++++++|. ||+|.=..-.-...|...-.++
T Consensus 239 ~~td~~~h~agdg~l~gi~~pnd~~chl~~~~y~~~~~~dyps~~~~~~~~~~~~i~~ifavt~~~~~~y~~l~~~~~~~ 318 (687)
T 3k6s_B 239 FATDDGFHFAGDGKLGAILTPNDGRCHLEDNLYKRSNEFDYPSVGQLAHKLAENNIQPIFAVTSRMVKTYEKLTEIIPKS 318 (687)
T ss_dssp EECSSCCCCTTGGGGGTCCCCCCSCCCCSSSBCSSGGGSCCCCGGGHHHHHHHTTCBCCEEECGGGHHHHHHHHHHSSSC
T ss_pred EECCCCCCCCCCCCCCEECCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCC
T ss_conf 98168744267642310404788731704883035666677898999999986492599997664443689999755775
Q ss_pred EEEEE----CCHH-HHHHHHHHHHHHHH
Q ss_conf 08982----8989-99999999999640
Q gi|254780833|r 341 RFYSV----QNSR-KLHDAFLRIGKEMV 363 (371)
Q Consensus 341 ~~y~~----~~~~-~L~~af~~I~~~i~ 363 (371)
..-.. .|.- =+.++|++|..++.
T Consensus 319 ~~~~l~~ds~ni~~li~~~y~~i~s~v~ 346 (687)
T 3k6s_B 319 AVGELSEDSSNVVQLIKNAYNKLSSRVF 346 (687)
T ss_dssp CEEECCTTCCSCGGGTTTHHHHHSSCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHHHHCEEE
T ss_conf 0476146647799999999986513799