RPSBLAST alignment for GI: 254780833 and conserved domain: cd01475
>gnl|CDD|29248 cd01475, vWA_Matrilin, VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity. Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.. Length = 224
Score = 39.9 bits (93), Expect = 0.001
Identities = 38/159 (23%), Positives = 65/159 (40%), Gaps = 26/159 (16%)
Query: 195 ATRSIRE---------MLDIIKSIPDVNNVVRSGLVTFSSKIVQTFPLAWGVQHIQEKIN 245
++RS+R + II S+ + R GLV +SS + Q FPL G + +
Sbjct: 11 SSRSVRPENFELVKQFLNQIIDSLDVGPDATRVGLVQYSSTVKQEFPL--GRFKSKADLK 68
Query: 246 RLI-----FGSTTKSTPGLEYAYNKIFDAKEKLEHIAKGHDDYKKYIIFLTDGENSSPNI 300
R + + T + ++YA N F E G + + I +TDG
Sbjct: 69 RAVRRMEYLETGTMTGLAIQYAMNNAFSEAEGAR---PGSERVPRVGIVVTDGRPQDDVS 125
Query: 301 DNKESLFYCNEAKRRGAIVYAIGVQAEAADQFLKNCASP 339
+ +A+ G ++A+GV A ++ L+ AS
Sbjct: 126 E------VAAKARALGIEMFAVGVG-RADEEELREIASE 157