RPSBLAST alignment of GI: 254780833 and protein with PDBid: 1rrk
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A Length = 497
Score = 70.7 bits (172), Expect = 5e-13
Identities = 36/214 (16%), Positives = 74/214 (34%), Gaps = 34/214 (15%)
Query: 169 LDMMMVLDVSLSMNDHFGPGMDKLGVATRSIREMLDIIKSIPDVNNVVRSGLVTFSSKIV 228
+++ +VLD S S+ G A + + +++ + S GLVT+++
Sbjct: 2 MNIYLVLDGSDSI------GASNFTGAKKVLVNLIEKVASYGVKPRY---GLVTYATYPK 52
Query: 229 QTFPL----AWGVQHIQEKINRLIF-----GSTTKSTPGLEYAYNKIFDAKEKLEHIAKG 279
+ + + +++N + + S T + L+ Y+ + + +G
Sbjct: 53 IWVKVSEADSSNADWVTKQLNEINYEDHKLKSGTNTKKALQAVYSMMSWPDDV---PPEG 109
Query: 280 HDDYKKYIIFLT-----DGENSSPNIDNKESLFYC----NEAKRRGAIVYAIGVQAEAAD 330
+ + II +T G + ID L Y + VY GV
Sbjct: 110 WNRTRHVIILMTDGLHNMGGDPITVIDEIRDLLYIGKDRKNPREDYLDVYVFGVGPLVNQ 169
Query: 331 QFLKNCASP----DRFYSVQNSRKLHDAFLRIGK 360
+ AS V++ L D F ++
Sbjct: 170 VNINALASKKDNEQHVCKVKDMECLEDVFYQMID 203