HHsearch alignment for GI: 254780834 and conserved domain: PRK04017

Probab=96.82  E-value=0.0099  Score=44.74  Aligned_cols=82  Identities=27%  Similarity=0.221  Sum_probs=60.6

Q ss_pred             CCCEEEEECCHHHHHHHHHCCCCCC-HHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCE
Q ss_conf             7870899714388999874355421-134321366267898851268189961788662257778888887775369730
Q gi|254780834|r  270 SSSFIILVEGYMDVLSLCQAGVQNV-VSSLGTALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRV  348 (648)
Q Consensus       270 ~~~~~i~vEGy~Dvi~l~~~G~~n~-va~~Gtalt~~~~~~l~r~~~~vvl~fDgD~AG~kAa~Ra~e~~l~~l~~g~~v  348 (648)
T Consensus        21 ~~g~~IlVEGkRD~~ALr~LG~~G~Ii~l~r~~l~~-ia~~~~~~~~~vIlL~DwDr~G~~L~~kl~~~L~~--------   91 (132)
T PRK04017         21 ENGAVIIVEGKRDELSLRKLGVRGEIIKLSRLPLFE-IALRASRLKKEVIILTDFDRKGEELAKKLSEYLQG--------   91 (132)
T ss_pred             CCCCEEEEECCCHHHHHHHCCCCCEEEEECCCCHHH-HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHHHHH--------
T ss_conf             599879996363699999849983189874840999-99999855983999971363217999999999986--------


Q ss_pred             EEEECCCCCCHHHHHHCC
Q ss_conf             675257888888997203
Q gi|254780834|r  349 NFVLLSRGEDPDSFIRCY  366 (648)
Q Consensus       349 ~vv~LP~G~DPDe~ir~~  366 (648)
T Consensus        92 ------~g~kvD~~~R~~  103 (132)
T PRK04017         92 ------YGIKVDLEIRRK  103 (132)
T ss_pred             ------CCCCCCHHHHHH
T ss_conf             ------899757899999