HHsearch alignment for GI: 254780834 and conserved domain: PRK05595
>PRK05595 replicative DNA helicase; Provisional.
Probab=96.52 E-value=0.13 Score=34.43 Aligned_cols=69 Identities=17% Similarity=0.213 Sum_probs=35.5
Q ss_pred CCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHH------
Q ss_conf 78588850100146553001038767653521011081788886433100002356787089971438899987------
Q gi|254780834|r 214 RGQVIAFGGRTLSKGESVKYLNSPETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLC------ 287 (648)
Q Consensus 214 ~g~~i~f~gR~l~~~~~~KYlNSpeT~if~K~~~Ly~l~~a~~~~~~~~~~~~~~~~~~~~i~vEGy~Dvi~l~------ 287 (648)
T Consensus 200 ~GdLiiiaaRP---~---------------mGKTa~alnia~~~a~~---------~g~~V~~fSlEMs~~ql~~R~ls~ 252 (444)
T PRK05595 200 KGDMILIAARP---S---------------MGKTTFALNIAEYAALR---------EGKSVVIFSLEMSKEQLAYKLLCS 252 (444)
T ss_pred CCCEEEEEECC---C---------------CCCHHHHHHHHHHHHHH---------CCCCEEEEECCCCHHHHHHHHHHH
T ss_conf 57779998579---8---------------98079999999999986---------699379995889999999999996
Q ss_pred HCCCCCCHHHHHCCCCHHHHHHH
Q ss_conf 43554211343213662678988
Q gi|254780834|r 288 QAGVQNVVSSLGTALTEYQLRLL 310 (648)
Q Consensus 288 ~~G~~n~va~~Gtalt~~~~~~l 310 (648)
T Consensus 253 ~s~i~~~~i~~g-~l~~~~~~~~ 274 (444)
T PRK05595 253 EANVDMLRLRTG-NLEDKDWENI 274 (444)
T ss_pred HCCCCCCCCCCC-CCCHHHHHHH
T ss_conf 469884423268-9799999999