HHsearch alignment of GI: 254780834 and MMDB domain: 1d0q_A_23-69

>1d0q_A (A:23-69) DNA primase; zinc-binding motif, protein; HET: DNA; 1.71A {Bacillus stearothermophilus}

Probab=99.56  E-value=2.6e-15  Score=159.80  Aligned_cols=47  Identities=47%  Similarity=1.025  Sum_probs=46.0

Q ss_pred             HHHHCCCEECCCCCCCCCEEEECCCCCCCCCCEEEECCCCEEEECCCCCCCC
Q ss_conf             5412221015887777755753458888587879817897467136888878
Q gi|254780834|r   21 IGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGFYYCFSCHVKGD   72 (648)
Q Consensus        21 v~~~v~l~~~g~n~~~~~~~~~cPfh~ektpsf~v~~~~~~~~cf~c~~~gd   72 (648)
                      ||+||+|+|+|+|     |||+||||+||||||+|+|+|++|||||||+|||
T Consensus         1 ig~~v~l~~~G~~-----~~~~CPfH~ek~PSf~V~~~k~~~~CFgCg~gGd   47 (47)
T 1d0q_A            1 IGEYVQLKRQGRN-----YFGLCPFHGEKTPSFSVSPEKQIFHCFGCGAGGN   47 (47)
T ss_dssp             HTTTSCCEEETTE-----EEECCSSSCCSSCCEEEETTTTEEEETTTCCEEC
T ss_pred             HHHCCCEEECCCC-----EEEECCCCCCCCCCEEECCCCCEEEEECCCCCCH
T ss_conf             9640786887966-----0787121279887438816841035630036633