HHsearch alignment of GI: 254780834 and MMDB domain: 1q57_A_75-203

>1q57_A (A:75-203) DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7}
Probab=99.59  E-value=3.1e-15  Score=159.19  Aligned_cols=117  Identities=15%  Similarity=0.126  Sum_probs=100.4

Q ss_pred             CHHCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHH---HHHCCCCHHHHHHHHHC---CCEEE
Q ss_conf             1011081788886433100002356787089971438899987435542113---43213662678988512---68189
Q gi|254780834|r  245 GKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVS---SLGTALTEYQLRLLWKL---SPRIV  318 (648)
Q Consensus       245 ~~~Ly~l~~a~~~~~~~~~~~~~~~~~~~~i~vEGy~Dvi~l~~~G~~n~va---~~Gtalt~~~~~~l~r~---~~~vv  318 (648)
                      |+.|||++.+.+.              +.++||||+||+++++++|+++++|   +.|++++..|+..+.++   ..+||
T Consensus         1 s~~ly~~~~~~~~--------------~~i~i~EG~~Dalsl~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~iv   66 (129)
T 1q57_A            1 SDALFGKHLWNGG--------------KKIVVTEGEIDMLTVMELQDCKYPVVSLGHGASAAKKTCAANYEYFDQFEQII   66 (129)
T ss_dssp             TTCEETGGGCSSE--------------EEEEEESSHHHHHHHTTTTTTCSCEEEESSTTTTHHHHHHTTHHHHHTEEEEE
T ss_pred             CCCCCCEECCCCC--------------CEEEEECCHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCEEE
T ss_conf             6642040204799--------------98999886689999999658886156157542104889999899863698799


Q ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCHHHHHHHHHHCCCH
Q ss_conf             961788662257778888887775369730675257888888997203668899886414992
Q gi|254780834|r  319 LCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPDSFIRCYGKTAFEKLIVESLPL  381 (648)
Q Consensus       319 l~fDgD~AG~kAa~Ra~e~~l~~l~~g~~v~vv~LP~G~DPDe~ir~~G~eaf~~ll~~A~~l  381 (648)
                      +|||+|+||++|+.|....+      ...-..+.+|+++||+|+++++|.++++..+++++++
T Consensus        67 i~~D~D~aG~~~a~~~~~~~------~~~~~~~~~p~~kD~nd~l~~~~~~~~~~~l~~a~~~  123 (129)
T 1q57_A           67 LMFDMDEAGRKAVEEAAQVL------PAGKVRVAVLPCKDANECHLNGHDREIMEQVWNAGPW  123 (129)
T ss_dssp             EECCSSHHHHHHHHHHHHHS------CGGGEEECCCSSSSHHHHHTTSCHHHHHHHHTTCCCC
T ss_pred             EECCCCHHHHHHHHHHHHHC------CCCEEEEEECCCCCCCHHHHHCCCHHHHHHHHHHCCC
T ss_conf             96089989999999998755------7755999856656874566642313456787752136