HHsearch alignment of GI: 254780834 and MMDB domain: 2fcj_A_
>2fcj_A (A:) Small toprim domain protein; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: MES; 1.30A {Geobacillus stearothermophilus}
Probab=99.75 E-value=7.2e-19 Score=192.55 Aligned_cols=104 Identities=13% Similarity=0.075 Sum_probs=94.3
Q ss_pred CCCEEEEECCHHHHHHHHHCCCCCCHHHH-HCCCCHHHHHHHHHCCC--EEEEEECCCCCCHHHHHHHHHHHHHHHHCCC
Q ss_conf 78708997143889998743554211343-21366267898851268--1899617886622577788888877753697
Q gi|254780834|r 270 SSSFIILVEGYMDVLSLCQAGVQNVVSSL-GTALTEYQLRLLWKLSP--RIVLCFDGDDPGLRAAYKAIDLVLCHLIPGN 346 (648)
Q Consensus 270 ~~~~~i~vEGy~Dvi~l~~~G~~n~va~~-Gtalt~~~~~~l~r~~~--~vvl~fDgD~AG~kAa~Ra~e~~l~~l~~g~ 346 (648)
..+++||||||||||+|||+|++||||++ |||+|.+|+++|+++++ +|++|||||.||++|+.+.... ..
T Consensus 3 k~~~viIVEG~~D~i~l~~~G~~n~Va~~~gta~~~~~l~~l~~~~~~~~iil~~D~D~aG~~a~~~l~~~-------l~ 75 (119)
T 2fcj_A 3 RVEKVIIVEGRSDKQKVAAVLNEPVVIVCTNGTISDARLEELADELEGYDVYLLADADEAGEKLRRQFRRM-------FP 75 (119)
T ss_dssp CCCEEEEESSHHHHHHHHHHBSSCCEEEECCSCCCHHHHHHHHHHTTTSEEEEECCSSHHHHHHHHHHHHH-------CT
T ss_pred CCCEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHH-------CC
T ss_conf 28989998088999999981898869768986373999999999708984899844892889999999986-------78
Q ss_pred CEEEEECCCC---------CCHHHHHHCCCHHHHHHHHHHCCC
Q ss_conf 3067525788---------888899720366889988641499
Q gi|254780834|r 347 RVNFVLLSRG---------EDPDSFIRCYGKTAFEKLIVESLP 380 (648)
Q Consensus 347 ~v~vv~LP~G---------~DPDe~ir~~G~eaf~~ll~~A~~ 380 (648)
.++++.+|.| +||+++++++|.+++..++++|.|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~d~~e~l~~~~~~~~~~~i~~a~~ 118 (119)
T 2fcj_A 76 EAEHLYIDRAYREVAAAPIWHLAQVLLRARFDVRIESLMRGRG 118 (119)
T ss_dssp TSEEECCCTTTCSTTTSCHHHHHHHHHHTTCCBCGGGTC----
T ss_pred CCCEEEECCCCCCHHCCCHHHHHHHHHHCCCHHHHHHHHHHCC
T ss_conf 5538885465410202456789999997761688988887337