HHsearch alignment of GI: 254780834 and MMDB domain: 2r6a_C_1-100
>2r6a_C (C:1-100) DNAG primase, helicase binding domain, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_G 1z8s_A*
Probab=97.11 E-value=0.0072 Score=45.45 Aligned_cols=90 Identities=13% Similarity=0.126 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 53037999999999847788999984430023799889999999999975388999899998851112899999999986
Q gi|254780834|r 478 KKPSLREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFLFSDFVEQKYFLPEEIHQRLCERGFGELLKQLDRQV 557 (648)
Q Consensus 478 ~~~~~~E~~LL~llI~~P~l~~~~~e~l~~~~f~~~~~~~L~~~i~~~~~~~~~~~~~~l~~~L~~~~l~elL~~L~~~~ 557 (648)
.....+|+.||+.|+++|+++..+... ...+|.++.++.|+..+...+.++..+++..+...+.++. ..++.++
T Consensus 4 ~~~~~AEr~LL~~ml~~~~~~~~v~~~-~~~~F~~~~yq~i~~~l~~~~~e~~~~~~a~f~~~l~de~-~~~~~~i---- 77 (100)
T 2r6a_C 4 PAFQNAERLLLAHXXRSRDVALVVQER-IGGRFNIEEHRALAAYIYAFYEEGHEADPGALISRIPGEL-QPLASEL---- 77 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHH-CCSCCSSHHHHHHHHHHHHHHTTSCCSCHHHHTTTSCSSS-HHHHHHH----
T ss_pred CCHHHHHHHHHHHHHCCHHHHHHHHHH-HHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHH-HHHHHHH----
T ss_conf 943999999999998794899999977-2246615989999999999984144305889999965111-3669999----
Q ss_pred HHHHHHHCCCCCCHHHHHH
Q ss_conf 5433320256899889999
Q gi|254780834|r 558 RDAGLWSATTEANIVDVRQ 576 (648)
Q Consensus 558 ~~~~~~~~~~e~~~~d~~e 576 (648)
.......+.+.+.+.+
T Consensus 78 ---~~~~~~~e~s~~ei~D 93 (100)
T 2r6a_C 78 ---SLLLIADDVSEQELED 93 (100)
T ss_dssp ---TTSCCCSSCCHHHHHH
T ss_pred ---HHHHCCCCCCHHHHHH
T ss_conf ---9987036651788999